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COL9A2 collagen type IX alpha 2 chain [ Gorilla gorilla gorilla (western lowland gorilla) ]

Gene ID: 101125128, updated on 1-Oct-2024

Summary

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Gene symbol
COL9A2
Gene description
collagen type IX alpha 2 chain
See related
Ensembl:ENSGGOG00000002596
Gene type
protein coding
RefSeq status
MODEL
Organism
Gorilla gorilla gorilla (sub-species: gorilla)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
Orthologs
human mouse all
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Genomic context

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See COL9A2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
33
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) 1 NC_073224.2 (199634553..199651898)
RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) 1 NC_073224.1 (46415994..46433341, complement)

Chromosome 1 - NC_073224.2Genomic Context describing neighboring genes Neighboring gene small ArfGAP2 Neighboring gene large ribosomal subunit protein eL21-like Neighboring gene zinc metallopeptidase STE24 Neighboring gene transmembrane and coiled-coil domains 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix structural constituent conferring tensile strength IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
collagen alpha-2(IX) chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

Genomic

  1. NC_073224.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Range
    199634553..199651898
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031003595.3 → XP_030859455.2  collagen alpha-2(IX) chain

Nucleotide Protein
Heading Accession and Version

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