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TMTC3 transmembrane O-mannosyltransferase targeting cadherins 3 [ Gorilla gorilla gorilla (western lowland gorilla) ]

Gene ID: 101125038, updated on 8-Mar-2024

Summary

Gene symbol
TMTC3
Gene description
transmembrane O-mannosyltransferase targeting cadherins 3
See related
Ensembl:ENSGGOG00000012696
Gene type
protein coding
RefSeq status
MODEL
Organism
Gorilla gorilla gorilla (sub-species: gorilla)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
Orthologs
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Genomic context

Location:
chromosome: 10
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) 10 NC_073234.2 (103530782..103588355)
RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) 12 NC_073236.1 (103256626..103314199)

Chromosome 10 - NC_073234.2Genomic Context describing neighboring genes Neighboring gene chromosome 10 C12orf50 homolog Neighboring gene RNA 5'-phosphate and 3'-OH ligase 1 Neighboring gene centrosomal protein 290 Neighboring gene suppressyn-like Neighboring gene protein FAM114A2-like

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
protein O-mannosyl-transferase TMTC3
Names
transmembrane and tetratricopeptide repeat containing 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

Genomic

  1. NC_073234.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Range
    103530782..103588355
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019039403.3XP_018894948.1  protein O-mannosyl-transferase TMTC3 isoform X2

    UniProtKB/TrEMBL
    G3RAC3
    Related
    ENSGGOP00000032063.1
    Conserved Domains (3) summary
    TIGR02917
    Location:435802
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:530557
    TPR; TPR repeat [structural motif]
    pfam08409
    Location:258331
    DUF1736; Domain of unknown function (DUF1736)
  2. XM_019039402.3XP_018894947.1  protein O-mannosyl-transferase TMTC3 isoform X1

    Conserved Domains (3) summary
    TIGR02917
    Location:435802
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:530557
    TPR; TPR repeat [structural motif]
    pfam08409
    Location:258331
    DUF1736; Domain of unknown function (DUF1736)