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EFNA5 ephrin A5 [ Gorilla gorilla gorilla (western lowland gorilla) ]

Gene ID: 101124086, updated on 1-Oct-2024

Summary

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Gene symbol
EFNA5
Gene description
ephrin A5
See related
Ensembl:ENSGGOG00000000371
Gene type
protein coding
RefSeq status
MODEL
Organism
Gorilla gorilla gorilla (sub-species: gorilla)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
Orthologs
human mouse all
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Genomic context

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See EFNA5 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) 4 NC_073228.2 (111171692..111466776, complement)
RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) 5 NC_073229.1 (109598166..109893800, complement)

Chromosome 4 - NC_073228.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109026850 Neighboring gene uncharacterized LOC129533506 Neighboring gene ubiquitin carboxyl-terminal hydrolase 7-like Neighboring gene F-box and leucine rich repeat protein 17 Neighboring gene collagen alpha-1(III) chain-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ephrin receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ephrin receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ephrin-A5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

Genomic

  1. NC_073228.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Range
    111171692..111466776 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019028474.3 → XP_018884019.1  ephrin-A5 isoform X2

    UniProtKB/TrEMBL
    G3SHR8
    Related
    ENSGGOP00000027658.2
    Conserved Domains (1) summary
    cd10425
    Location:30 → 159
    Ephrin-A_Ectodomain; Ectodomain of Ephrin A

  2. XM_019028473.4 → XP_018884018.1  ephrin-A5 isoform X1

    UniProtKB/TrEMBL
    A0A2I2YB87, G3QDP0
    Related
    ENSGGOP00000000364.2
    Conserved Domains (1) summary
    cd10425
    Location:30 → 159
    Ephrin-A_Ectodomain; Ectodomain of Ephrin A
Nucleotide Protein
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