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GAA alpha glucosidase [ Ovis aries (sheep) ]

Gene ID: 101121692, updated on 8-Mar-2024

Summary

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Gene symbol
GAA
Gene description
alpha glucosidase
See related
EnsemblRapid:ENSOARG00020014611
Gene type
protein coding
RefSeq status
MODEL
Organism
Ovis aries
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
Orthologs
human mouse all
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Genomic context

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See GAA in Genome Data Viewer
Location:
chromosome: 11
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 11 NC_056064.1 (51829779..51845739, complement)

Chromosome 11 - NC_056064.1Genomic Context describing neighboring genes Neighboring gene caspase recruitment domain family member 14 Neighboring gene N-sulfoglucosamine sulfohydrolase Neighboring gene eukaryotic translation initiation factor 4A3 Neighboring gene coiled-coil domain 40 molecular ruler complex subunit Neighboring gene TBC1 domain family member 16 Neighboring gene uncharacterized LOC121820701

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056064.1 Chromosome 11 Reference ARS-UI_Ramb_v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lysosome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysosomal alpha-glucosidase
Names
glucosidase alpha, acid

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UI_Ramb_v3.0 Primary Assembly

Genomic

  1. NC_056064.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Range
    51829779..51845739 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042256782.1 → XP_042112716.1  lysosomal alpha-glucosidase isoform X1

    UniProtKB/TrEMBL
    W5NW80
    Related
    ENSOARP00020054315.1, ENSOART00020081120.1
    Conserved Domains (3) summary
    smart00018
    Location:166 → 216
    PD; P or trefoil or TFF domain
    cd06602
    Location:443 → 801
    GH31_MGAM_SI_GAA; maltase-glucoamylase, sucrase-isomaltase, lysosomal acid alpha-glucosidase
    cd14752
    Location:330 → 443
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)

  2. XM_027974242.3 → XP_027830043.1  lysosomal alpha-glucosidase isoform X2

    UniProtKB/TrEMBL
    W5NW80
    Related
    ENSOARP00020018520.2, ENSOART00020022356.2
    Conserved Domains (4) summary
    smart00018
    Location:69 → 119
    PD; P or trefoil or TFF domain
    cd06602
    Location:346 → 704
    GH31_MGAM_SI_GAA; maltase-glucoamylase, sucrase-isomaltase, lysosomal acid alpha-glucosidase
    cd14752
    Location:233 → 346
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)
    pfam16863
    Location:134 → 240
    NtCtMGAM_N; N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase

  3. XM_042256786.2 → XP_042112720.1  lysosomal alpha-glucosidase isoform X2

    UniProtKB/TrEMBL
    W5NW80
    Conserved Domains (4) summary
    smart00018
    Location:69 → 119
    PD; P or trefoil or TFF domain
    cd06602
    Location:346 → 704
    GH31_MGAM_SI_GAA; maltase-glucoamylase, sucrase-isomaltase, lysosomal acid alpha-glucosidase
    cd14752
    Location:233 → 346
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)
    pfam16863
    Location:134 → 240
    NtCtMGAM_N; N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase

  4. XM_042256785.2 → XP_042112719.1  lysosomal alpha-glucosidase isoform X2

    UniProtKB/TrEMBL
    W5NW80
    Conserved Domains (4) summary
    smart00018
    Location:69 → 119
    PD; P or trefoil or TFF domain
    cd06602
    Location:346 → 704
    GH31_MGAM_SI_GAA; maltase-glucoamylase, sucrase-isomaltase, lysosomal acid alpha-glucosidase
    cd14752
    Location:233 → 346
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)
    pfam16863
    Location:134 → 240
    NtCtMGAM_N; N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase

  5. XM_027974244.3 → XP_027830045.1  lysosomal alpha-glucosidase isoform X2

    UniProtKB/TrEMBL
    W5NW80
    Related
    ENSOARP00020062503.1, ENSOART00020061101.1
    Conserved Domains (4) summary
    smart00018
    Location:69 → 119
    PD; P or trefoil or TFF domain
    cd06602
    Location:346 → 704
    GH31_MGAM_SI_GAA; maltase-glucoamylase, sucrase-isomaltase, lysosomal acid alpha-glucosidase
    cd14752
    Location:233 → 346
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)
    pfam16863
    Location:134 → 240
    NtCtMGAM_N; N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase

  6. XM_042256787.2 → XP_042112721.1  lysosomal alpha-glucosidase isoform X2

    UniProtKB/TrEMBL
    W5NW80
    Conserved Domains (4) summary
    smart00018
    Location:69 → 119
    PD; P or trefoil or TFF domain
    cd06602
    Location:346 → 704
    GH31_MGAM_SI_GAA; maltase-glucoamylase, sucrase-isomaltase, lysosomal acid alpha-glucosidase
    cd14752
    Location:233 → 346
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)
    pfam16863
    Location:134 → 240
    NtCtMGAM_N; N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase

  7. XM_042256784.2 → XP_042112718.1  lysosomal alpha-glucosidase isoform X2

    UniProtKB/TrEMBL
    W5NW80
    Conserved Domains (4) summary
    smart00018
    Location:69 → 119
    PD; P or trefoil or TFF domain
    cd06602
    Location:346 → 704
    GH31_MGAM_SI_GAA; maltase-glucoamylase, sucrase-isomaltase, lysosomal acid alpha-glucosidase
    cd14752
    Location:233 → 346
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)
    pfam16863
    Location:134 → 240
    NtCtMGAM_N; N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase
Nucleotide Protein Strain
Heading Accession and Version

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