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CH25H cholesterol 25-hydroxylase [ Ovis aries (sheep) ]

Gene ID: 101121645, updated on 8-Mar-2024

Summary

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Gene symbol
CH25H
Gene description
cholesterol 25-hydroxylase
See related
EnsemblRapid:ENSOARG00020008637
Gene type
protein coding
RefSeq status
MODEL
Organism
Ovis aries
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
Orthologs
human mouse all
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Genomic context

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See CH25H in Genome Data Viewer
Location:
chromosome: 22
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 22 NC_056075.1 (10770201..10771594, complement)

Chromosome 22 - NC_056075.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132658442 Neighboring gene actin alpha 2, smooth muscle Neighboring gene Fas cell surface death receptor Neighboring gene lipase A, lysosomal acid type Neighboring gene DNA fragmentation factor subunit alpha-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056075.1 Chromosome 22 Reference ARS-UI_Ramb_v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables C-4 methylsterol oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables steroid hydroxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sterol biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cholesterol 25-hydroxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UI_Ramb_v3.0 Primary Assembly

Genomic

  1. NC_056075.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Range
    10770201..10771594 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012102514.4 → XP_011957904.2  cholesterol 25-hydroxylase

    UniProtKB/TrEMBL
    A0A835ZJM1
    Related
    ENSOARP00020010891.1, ENSOART00020013219.2
Nucleotide Protein Strain
Heading Accession and Version

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