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FREM1 FRAS1 related extracellular matrix 1 [ Ovis aries (sheep) ]

Gene ID: 101121399, updated on 10-Oct-2024

Summary

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Gene symbol
FREM1
Gene description
FRAS1 related extracellular matrix 1
See related
EnsemblRapid:ENSOARG00020014731
Gene type
protein coding
RefSeq status
MODEL
Organism
Ovis aries
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
Orthologs
human mouse all
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Genomic context

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See FREM1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
41
Annotation release Status Assembly Chr Location
RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 2 NC_056055.1 (83375625..83558994, complement)

Chromosome 2 - NC_056055.1Genomic Context describing neighboring genes Neighboring gene zinc finger DHHC-type palmitoyltransferase 21 Neighboring gene cerberus 1, DAN family BMP antagonist Neighboring gene tetratricopeptide repeat domain 39B Neighboring gene small nuclear RNA activating complex polypeptide 3 Neighboring gene PC4 and SRSF1 interacting protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056055.1 Chromosome 2 Reference ARS-UI_Ramb_v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell communication IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
FRAS1-related extracellular matrix protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UI_Ramb_v3.0 Primary Assembly

Genomic

  1. NC_056055.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Range
    83375625..83558994 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060409486.1 → XP_060265469.1  FRAS1-related extracellular matrix protein 1 isoform X2

  2. XM_060409483.1 → XP_060265466.1  FRAS1-related extracellular matrix protein 1 isoform X1

  3. XM_060409484.1 → XP_060265467.1  FRAS1-related extracellular matrix protein 1 isoform X1

  4. XM_042243458.2 → XP_042099392.1  FRAS1-related extracellular matrix protein 1 isoform X2

    UniProtKB/TrEMBL
    W5PWY4
    Conserved Domains (2) summary
    smart00034
    Location:2032 → 2154
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    cl02522
    Location:1725 → 1808
    Calx-beta; Calx-beta domain

  5. XM_060409488.1 → XP_060265471.1  FRAS1-related extracellular matrix protein 1 isoform X3

  6. XM_015093208.4 → XP_014948694.3  FRAS1-related extracellular matrix protein 1 isoform X1

    UniProtKB/TrEMBL
    W5PWY4
    Related
    ENSOARP00020018886.2, ENSOART00020022776.2
    Conserved Domains (2) summary
    smart00034
    Location:2055 → 2177
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    cl02522
    Location:1748 → 1831
    Calx-beta; Calx-beta domain

  7. XM_060409487.1 → XP_060265470.1  FRAS1-related extracellular matrix protein 1 isoform X2

  8. XM_060409489.1 → XP_060265472.1  FRAS1-related extracellular matrix protein 1 isoform X3

  9. XM_060409481.1 → XP_060265464.1  FRAS1-related extracellular matrix protein 1 isoform X1

  10. XM_060409485.1 → XP_060265468.1  FRAS1-related extracellular matrix protein 1 isoform X2

  11. XM_060409490.1 → XP_060265473.1  FRAS1-related extracellular matrix protein 1 isoform X3

  12. XM_042243457.2 → XP_042099391.1  FRAS1-related extracellular matrix protein 1 isoform X1

    UniProtKB/TrEMBL
    W5PWY4
    Conserved Domains (2) summary
    smart00034
    Location:2055 → 2177
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    cl02522
    Location:1748 → 1831
    Calx-beta; Calx-beta domain

  13. XM_060409491.1 → XP_060265474.1  FRAS1-related extracellular matrix protein 1 isoform X3

  14. XM_060409482.1 → XP_060265465.1  FRAS1-related extracellular matrix protein 1 isoform X1

  15. XM_042243460.2 → XP_042099394.1  FRAS1-related extracellular matrix protein 1 isoform X5

    UniProtKB/TrEMBL
    W5PWY4
    Conserved Domains (1) summary
    cl02522
    Location:1748 → 1831
    Calx-beta; Calx-beta domain

  16. XM_042243459.2 → XP_042099393.1  FRAS1-related extracellular matrix protein 1 isoform X4

    UniProtKB/TrEMBL
    W5PWY4
    Conserved Domains (1) summary
    cl02522
    Location:1748 → 1831
    Calx-beta; Calx-beta domain

  17. XM_042243462.2 → XP_042099396.1  FRAS1-related extracellular matrix protein 1 isoform X7

  18. XM_042243461.2 → XP_042099395.1  FRAS1-related extracellular matrix protein 1 isoform X6

  19. XM_042243463.2 → XP_042099397.1  FRAS1-related extracellular matrix protein 1 isoform X8

  20. XM_060409495.1 → XP_060265478.1  FRAS1-related extracellular matrix protein 1 isoform X9

  21. XM_060409492.1 → XP_060265475.1  FRAS1-related extracellular matrix protein 1 isoform X9

  22. XM_060409493.1 → XP_060265476.1  FRAS1-related extracellular matrix protein 1 isoform X9

  23. XM_060409494.1 → XP_060265477.1  FRAS1-related extracellular matrix protein 1 isoform X9

RNA

  1. XR_009599245.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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