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LPIN1 lipin 1 [ Ovis aries (sheep) ]

Gene ID: 101120647, updated on 10-Oct-2024

Summary

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Gene symbol
LPIN1
Gene description
lipin 1
See related
EnsemblRapid:ENSOARG00020012462
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Ovis aries
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
Orthologs
human mouse all
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Genomic context

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See LPIN1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 3 NC_056056.1 (20594488..20722089)

Chromosome 3 - NC_056056.1Genomic Context describing neighboring genes Neighboring gene growth regulating estrogen receptor binding 1 Neighboring gene neurotensin receptor 2 Neighboring gene uncharacterized LOC132659566 Neighboring gene uncharacterized LOC121819007

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056056.1 Chromosome 3 Reference ARS-UI_Ramb_v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to insulin stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial outer membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidate phosphatase LPIN1
NP_001267629.1
XP_027821542.1
XP_027821543.1
XP_060267572.1
XP_060267573.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001280700.1 → NP_001267629.1  phosphatidate phosphatase LPIN1

    See identical proteins and their annotated locations for NP_001267629.1

    Status: PROVISIONAL

    Source sequence(s)
    JX392387
    UniProtKB/TrEMBL
    A0A6P9FQS0, J9S2T1, W5Q3P8
    Conserved Domains (3) summary
    pfam04571
    Location:1 → 107
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:631 → 856
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:469 → 560
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UI_Ramb_v3.0 Primary Assembly

Genomic

  1. NC_056056.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Range
    20594488..20722089
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027965741.2 → XP_027821542.1  phosphatidate phosphatase LPIN1 isoform X1

    UniProtKB/TrEMBL
    W5Q3P8
    Related
    ENSOARP00020061431.1, ENSOART00020044411.1

  2. XM_027965742.2 → XP_027821543.1  phosphatidate phosphatase LPIN1 isoform X2

    UniProtKB/TrEMBL
    A0A836A6I3

  3. XM_060411589.1 → XP_060267572.1  phosphatidate phosphatase LPIN1 isoform X3

    Related
    ENSOARP00020036367.1, ENSOART00020079586.1

  4. XM_060411590.1 → XP_060267573.1  phosphatidate phosphatase LPIN1 isoform X4

    Related
    ENSOARP00020054421.1, ENSOART00020082054.1
Nucleotide Protein Strain
Heading Accession and Version

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