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FAM20B FAM20B glycosaminoglycan xylosylkinase [ Ovis aries (sheep) ]

Gene ID: 101120593, updated on 8-Mar-2024

Summary

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Gene symbol
FAM20B
Gene description
FAM20B glycosaminoglycan xylosylkinase
See related
EnsemblRapid:ENSOARG00020026589
Gene type
protein coding
RefSeq status
MODEL
Organism
Ovis aries
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
Orthologs
human mouse all
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Genomic context

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See FAM20B in Genome Data Viewer
Location:
chromosome: 12
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 12 NC_056065.1 (59793457..59838200)

Chromosome 12 - NC_056065.1Genomic Context describing neighboring genes Neighboring gene Ral GEF with PH domain and SH3 binding motif 2 Neighboring gene angiopoietin like 1 Neighboring gene uncharacterized LOC132657520 Neighboring gene torsin family 3 member A Neighboring gene ABL proto-oncogene 2, non-receptor tyrosine kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056065.1 Chromosome 12 Reference ARS-UI_Ramb_v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphotransferase activity, alcohol group as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycosaminoglycan xylosylkinase
Names
family with sequence similarity 20, member B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UI_Ramb_v3.0 Primary Assembly

Genomic

  1. NC_056065.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Range
    59793457..59838200
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042229403.2 → XP_042085337.1  glycosaminoglycan xylosylkinase isoform X1

    UniProtKB/TrEMBL
    A0A6P3EEC4, A0A6P3YKJ8, W5Q4B8
    Related
    ENSOARP00020038558.1, ENSOART00020048512.1
    Conserved Domains (1) summary
    cd10470
    Location:188 → 394
    FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase

  2. XM_060396641.1 → XP_060252624.1  glycosaminoglycan xylosylkinase isoform X1

    UniProtKB/TrEMBL
    A0A6P3EEC4, A0A6P3YKJ8, W5Q4B8

  3. XM_060396645.1 → XP_060252628.1  glycosaminoglycan xylosylkinase isoform X1

    UniProtKB/TrEMBL
    A0A6P3EEC4, A0A6P3YKJ8, W5Q4B8

  4. XM_060396642.1 → XP_060252625.1  glycosaminoglycan xylosylkinase isoform X1

    UniProtKB/TrEMBL
    A0A6P3EEC4, A0A6P3YKJ8, W5Q4B8

  5. XM_042229401.1 → XP_042085335.1  glycosaminoglycan xylosylkinase isoform X1

    UniProtKB/TrEMBL
    A0A6P3EEC4, A0A6P3YKJ8, W5Q4B8
    Conserved Domains (1) summary
    cd10470
    Location:188 → 394
    FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase

  6. XM_060396643.1 → XP_060252626.1  glycosaminoglycan xylosylkinase isoform X1

    UniProtKB/TrEMBL
    A0A6P3EEC4, A0A6P3YKJ8, W5Q4B8

  7. XM_060396644.1 → XP_060252627.1  glycosaminoglycan xylosylkinase isoform X1

    UniProtKB/TrEMBL
    A0A6P3EEC4, A0A6P3YKJ8, W5Q4B8

  8. XM_060396640.1 → XP_060252623.1  glycosaminoglycan xylosylkinase isoform X1

    UniProtKB/TrEMBL
    A0A6P3EEC4, A0A6P3YKJ8, W5Q4B8

  9. XM_042229405.2 → XP_042085339.1  glycosaminoglycan xylosylkinase isoform X1

    UniProtKB/TrEMBL
    A0A6P3EEC4, A0A6P3YKJ8, W5Q4B8
    Conserved Domains (1) summary
    cd10470
    Location:188 → 394
    FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase

  10. XM_015099338.4 → XP_014954824.1  glycosaminoglycan xylosylkinase isoform X1

    UniProtKB/TrEMBL
    A0A6P3EEC4, A0A6P3YKJ8, W5Q4B8
    Conserved Domains (1) summary
    cd10470
    Location:188 → 394
    FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase

  11. XM_060396646.1 → XP_060252629.1  glycosaminoglycan xylosylkinase isoform X2

  12. XM_042229410.2 → XP_042085344.1  glycosaminoglycan xylosylkinase isoform X1

    UniProtKB/TrEMBL
    A0A6P3EEC4, A0A6P3YKJ8, W5Q4B8
    Conserved Domains (1) summary
    cd10470
    Location:188 → 394
    FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase

  13. XM_015099339.4 → XP_014954825.1  glycosaminoglycan xylosylkinase isoform X1

    UniProtKB/TrEMBL
    A0A6P3EEC4, A0A6P3YKJ8, W5Q4B8
    Conserved Domains (1) summary
    cd10470
    Location:188 → 394
    FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase

  14. XM_042229409.2 → XP_042085343.1  glycosaminoglycan xylosylkinase isoform X1

    UniProtKB/TrEMBL
    A0A6P3EEC4, A0A6P3YKJ8, W5Q4B8
    Conserved Domains (1) summary
    cd10470
    Location:188 → 394
    FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase

  15. XM_042229408.2 → XP_042085342.1  glycosaminoglycan xylosylkinase isoform X1

    UniProtKB/TrEMBL
    A0A6P3EEC4, A0A6P3YKJ8, W5Q4B8
    Conserved Domains (1) summary
    cd10470
    Location:188 → 394
    FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase
Nucleotide Protein Strain
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