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GNPDA2 glucosamine-6-phosphate deaminase 2 [ Ovis aries (sheep) ]

Gene ID: 101120577, updated on 6-Jun-2024

Summary

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Gene symbol
GNPDA2
Gene description
glucosamine-6-phosphate deaminase 2
See related
EnsemblRapid:ENSOARG00020038278
Gene type
protein coding
RefSeq status
MODEL
Organism
Ovis aries
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
Orthologs
human mouse all
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Genomic context

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See GNPDA2 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 6 NC_056059.1 (63997812..64061442, complement)

Chromosome 6 - NC_056059.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132660008 Neighboring gene uncharacterized LOC114115307 Neighboring gene Yip1 domain family member 7 Neighboring gene GTP binding elongation factor GUF1 Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene kinesin-like protein KIF3C

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056059.1 Chromosome 6 Reference ARS-UI_Ramb_v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucosamine-6-phosphate deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables identical protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in N-acetylneuraminate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glucosamine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucosamine-6-phosphate isomerase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UI_Ramb_v3.0 Primary Assembly

Genomic

  1. NC_056059.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Range
    63997812..64061442 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060417601.1 → XP_060273584.1  glucosamine-6-phosphate isomerase 2 isoform X1

    UniProtKB/TrEMBL
    W5Q0A7
    Related
    ENSOARP00020055789.1, ENSOART00020072190.1

  2. XM_060417602.1 → XP_060273585.1  glucosamine-6-phosphate isomerase 2 isoform X3

    UniProtKB/TrEMBL
    W5Q0A7

  3. XM_060417604.1 → XP_060273587.1  glucosamine-6-phosphate isomerase 2 isoform X1

    UniProtKB/TrEMBL
    W5Q0A7

  4. XM_027970976.2 → XP_027826777.1  glucosamine-6-phosphate isomerase 2 isoform X5

    Conserved Domains (1) summary
    cl00339
    Location:1 → 183
    SugarP_isomerase; Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose ...

  5. XM_012179892.4 → XP_012035282.1  glucosamine-6-phosphate isomerase 2 isoform X4

    See identical proteins and their annotated locations for XP_012035282.1

    Conserved Domains (1) summary
    cl00339
    Location:1 → 219
    SugarP_isomerase; Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose ...

  6. XM_004009802.5 → XP_004009851.1  glucosamine-6-phosphate isomerase 2 isoform X2

    See identical proteins and their annotated locations for XP_004009851.1

    UniProtKB/TrEMBL
    A0A6P3EF29, W5Q0A7, W5Q0A8
    Related
    ENSOARP00020049534.1, ENSOART00020051330.1
    Conserved Domains (1) summary
    PRK00443
    Location:1 → 258
    nagB; glucosamine-6-phosphate deaminase; Provisional
Nucleotide Protein Strain
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