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IBSP integrin binding sialoprotein [ Ovis aries (sheep) ]

Gene ID: 101120495, updated on 8-Mar-2024

Summary

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Gene symbol
IBSP
Gene description
integrin binding sialoprotein
See related
EnsemblRapid:ENSOARG00020024136
Gene type
protein coding
RefSeq status
MODEL
Organism
Ovis aries
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
Orthologs
human mouse all
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Genomic context

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See IBSP in Genome Data Viewer
Location:
chromosome: 6
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 6 NC_056059.1 (37551839..37565507, complement)

Chromosome 6 - NC_056059.1Genomic Context describing neighboring genes Neighboring gene secreted phosphoprotein 1 Neighboring gene matrix extracellular phosphoglycoprotein Neighboring gene triosephosphate isomerase-like Neighboring gene transfer RNA alanine (anticodon CGC)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056059.1 Chromosome 6 Reference ARS-UI_Ramb_v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in bone mineralization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ossification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bone sialoprotein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UI_Ramb_v3.0 Primary Assembly

Genomic

  1. NC_056059.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Range
    37551839..37565507 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004009717.5 → XP_004009766.1  bone sialoprotein 2

    UniProtKB/TrEMBL
    A0A6P3EAA1, W5NY80, W5NY83
    Related
    ENSOARP00020031200.1, ENSOART00020037678.2
    Conserved Domains (1) summary
    pfam05432
    Location:17 → 303
    BSP_II; Bone sialoprotein II (BSP-II)
Nucleotide Protein Strain
Heading Accession and Version

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