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CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 [ Ovis aries (sheep) ]

Gene ID: 101120469, updated on 10-Oct-2024

Summary

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Gene symbol
CSGALNACT1
Gene description
chondroitin sulfate N-acetylgalactosaminyltransferase 1
See related
EnsemblRapid:ENSOARG00020025733
Gene type
protein coding
RefSeq status
MODEL
Organism
Ovis aries
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
Orthologs
human mouse all
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Genomic context

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See CSGALNACT1 in Genome Data Viewer
Location:
chromosome: 26
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 26 NC_056079.1 (37227924..37564639)

Chromosome 26 - NC_056079.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132658681 Neighboring gene integrator complex subunit 10 Neighboring gene uncharacterized LOC121818075 Neighboring gene uncharacterized LOC114110991 Neighboring gene U1 spliceosomal RNA Neighboring gene SH2 domain containing 4A Neighboring gene transfer RNA cysteine (anticodon ACA)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056079.1 Chromosome 26 Reference ARS-UI_Ramb_v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroitin sulfate N-acetylgalactosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UI_Ramb_v3.0 Primary Assembly

Genomic

  1. NC_056079.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Range
    37227924..37564639
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027962570.2 → XP_027818371.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P7DHW8, W5P1A2
    Conserved Domains (1) summary
    cl11394
    Location:73 → 499
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  2. XM_060407077.1 → XP_060263060.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P7DHW8

  3. XM_060407076.1 → XP_060263059.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P7DHW8

  4. XM_042241408.1 → XP_042097342.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P7DHW8, W5P1A2
    Conserved Domains (1) summary
    cl11394
    Location:73 → 499
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  5. XM_042241411.1 → XP_042097345.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P7DHW8, W5P1A2
    Conserved Domains (1) summary
    cl11394
    Location:73 → 499
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  6. XM_027962575.3 → XP_027818376.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P7DHW8, W5P1A2
    Conserved Domains (1) summary
    cl11394
    Location:73 → 499
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  7. XM_060407081.1 → XP_060263064.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P7DHW8

  8. XM_060407082.1 → XP_060263065.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P7DHW8

  9. XM_027962571.2 → XP_027818372.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P7DHW8, W5P1A2
    Conserved Domains (1) summary
    cl11394
    Location:73 → 499
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  10. XM_060407074.1 → XP_060263057.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P7DHW8

  11. XM_060407073.1 → XP_060263056.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P7DHW8

  12. XM_060407080.1 → XP_060263063.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P7DHW8

  13. XM_060407069.1 → XP_060263052.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P7DHW8

  14. XM_060407084.1 → XP_060263067.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P7DHW8

  15. XM_060407083.1 → XP_060263066.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P7DHW8

  16. XM_027962573.2 → XP_027818374.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P7DHW8, W5P1A2
    Related
    ENSOARP00020033485.1, ENSOART00020040391.2
    Conserved Domains (1) summary
    cl11394
    Location:73 → 499
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  17. XM_060407072.1 → XP_060263055.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P7DHW8

  18. XM_060407085.1 → XP_060263068.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X2

    Related
    ENSOARP00020050484.1, ENSOART00020077063.1

  19. XM_060407071.1 → XP_060263054.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P7DHW8

  20. XM_060407079.1 → XP_060263062.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P7DHW8

  21. XM_060407066.1 → XP_060263049.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P7DHW8

  22. XM_060407070.1 → XP_060263053.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P7DHW8

  23. XM_060407067.1 → XP_060263050.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P7DHW8

  24. XM_060407078.1 → XP_060263061.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P7DHW8

  25. XM_042241412.1 → XP_042097346.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P7DHW8, W5P1A2
    Conserved Domains (1) summary
    cl11394
    Location:73 → 499
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  26. XM_042241414.1 → XP_042097348.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P7DHW8, W5P1A2
    Conserved Domains (1) summary
    cl11394
    Location:73 → 499
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  27. XM_060407075.1 → XP_060263058.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P7DHW8

  28. XM_042241409.1 → XP_042097343.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P7DHW8, W5P1A2
    Conserved Domains (1) summary
    cl11394
    Location:73 → 499
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  29. XM_060407068.1 → XP_060263051.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P7DHW8
Nucleotide Protein Strain
Heading Accession and Version

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