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COLEC11 collectin subfamily member 11 [ Ovis aries (sheep) ]

Gene ID: 101120299, updated on 8-Mar-2024

Summary

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Gene symbol
COLEC11
Gene description
collectin subfamily member 11
See related
EnsemblRapid:ENSOARG00020002775
Gene type
protein coding
RefSeq status
MODEL
Organism
Ovis aries
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 2 NC_056055.1 (1974170..1997029)

Chromosome 2 - NC_056055.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121818573 Neighboring gene ribosomal protein S7 Neighboring gene allantoicase Neighboring gene doublecortin domain containing 2C

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056055.1 Chromosome 2 Reference ARS-UI_Ramb_v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
collectin-11
Names
collectin sub-family member 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UI_Ramb_v3.0 Primary Assembly

Genomic

  1. NC_056055.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Range
    1974170..1997029
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042242770.2 → XP_042098704.1  collectin-11 isoform X1

    UniProtKB/TrEMBL
    W5P5V0
    Conserved Domains (2) summary
    cd03591
    Location:147 → 262
    CLECT_collectin_like; C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)
    pfam01391
    Location:43 → 94
    Collagen; Collagen triple helix repeat (20 copies)

  2. XM_004003959.5 → XP_004004008.1  collectin-11 isoform X1

    See identical proteins and their annotated locations for XP_004004008.1

    UniProtKB/TrEMBL
    W5P5V0
    Related
    ENSOARP00020037700.1, ENSOART00020004281.2
    Conserved Domains (2) summary
    cd03591
    Location:147 → 262
    CLECT_collectin_like; C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)
    pfam01391
    Location:43 → 94
    Collagen; Collagen triple helix repeat (20 copies)

  3. XM_042242771.1 → XP_042098705.1  collectin-11 isoform X2

    UniProtKB/TrEMBL
    W5P5V0
    Related
    ENSOARP00020042183.1, ENSOART00020004284.2
    Conserved Domains (1) summary
    cd03591
    Location:123 → 238
    CLECT_collectin_like; C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)
Nucleotide Protein Strain
Heading Accession and Version

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