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GFRA1 GDNF family receptor alpha 1 [ Ovis aries (sheep) ]

Gene ID: 101120125, updated on 10-Oct-2024

Summary

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Gene symbol
GFRA1
Gene description
GDNF family receptor alpha 1
See related
EnsemblRapid:ENSOARG00020024906
Gene type
protein coding
RefSeq status
MODEL
Organism
Ovis aries
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
Orthologs
human mouse all
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Genomic context

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See GFRA1 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 22 NC_056075.1 (35993445..36229287, complement)

Chromosome 22 - NC_056075.1Genomic Context describing neighboring genes Neighboring gene attractin like 1 Neighboring gene transfer RNA tyrosine (anticodon AUA) Neighboring gene uncharacterized LOC132658419 Neighboring gene coiled-coil domain containing 172 Neighboring gene pancreatic lipase related protein 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056075.1 Chromosome 22 Reference ARS-UI_Ramb_v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDNF family receptor alpha-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UI_Ramb_v3.0 Primary Assembly

Genomic

  1. NC_056075.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Range
    35993445..36229287 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027960172.3 → XP_027815973.1  GDNF family receptor alpha-1 isoform X1

    UniProtKB/TrEMBL
    A0A835ZLF1
    Conserved Domains (2) summary
    smart00907
    Location:154 → 233
    GDNF; GDNF/GAS1 domain
    pfam02351
    Location:243 → 337
    GDNF; GDNF/GAS1 domain

  2. XM_060404737.1 → XP_060260720.1  GDNF family receptor alpha-1 isoform X2

    Related
    ENSOARP00020032311.2, ENSOART00020039003.2

  3. XM_042238457.2 → XP_042094391.1  GDNF family receptor alpha-1 isoform X1

    UniProtKB/TrEMBL
    A0A835ZLF1
    Related
    ENSOARP00020032330.2, ENSOART00020039032.2
    Conserved Domains (2) summary
    smart00907
    Location:154 → 233
    GDNF; GDNF/GAS1 domain
    pfam02351
    Location:243 → 337
    GDNF; GDNF/GAS1 domain

  4. XM_042238459.2 → XP_042094393.1  GDNF family receptor alpha-1 isoform X1

    UniProtKB/TrEMBL
    A0A835ZLF1
    Related
    ENSOARP00020053662.1, ENSOART00020074311.1
    Conserved Domains (2) summary
    smart00907
    Location:154 → 233
    GDNF; GDNF/GAS1 domain
    pfam02351
    Location:243 → 337
    GDNF; GDNF/GAS1 domain
Nucleotide Protein Strain
Heading Accession and Version

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