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GLB1L galactosidase beta 1 like [ Ovis aries (sheep) ]

Gene ID: 101115764, updated on 8-Mar-2024

Summary

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Gene symbol
GLB1L
Gene description
galactosidase beta 1 like
See related
EnsemblRapid:ENSOARG00020011884
Gene type
protein coding
RefSeq status
MODEL
Organism
Ovis aries
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
Orthologs
human mouse all
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Genomic context

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See GLB1L in Genome Data Viewer
Location:
chromosome: 2
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 2 NC_056055.1 (221184376..221192978, complement)

Chromosome 2 - NC_056055.1Genomic Context describing neighboring genes Neighboring gene zinc finger AN1-type containing 2B Neighboring gene ATP binding cassette subfamily B member 6 (LAN blood group) Neighboring gene autophagy related 9A Neighboring gene ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1 Neighboring gene serine/threonine kinase 16 Neighboring gene tubulin alpha 4a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056055.1 Chromosome 2 Reference ARS-UI_Ramb_v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in vacuole IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-galactosidase-1-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UI_Ramb_v3.0 Primary Assembly

Genomic

  1. NC_056055.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Range
    221184376..221192978 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027965209.3 → XP_027821010.1  beta-galactosidase-1-like protein isoform X3

  2. XM_004004946.6 → XP_004004995.1  beta-galactosidase-1-like protein isoform X1

    See identical proteins and their annotated locations for XP_004004995.1

    UniProtKB/TrEMBL
    A0A6P3E216, W5QFF0
    Related
    ENSOARP00020015359.1, ENSOART00020018560.2
    Conserved Domains (2) summary
    pfam01301
    Location:37 → 352
    Glyco_hydro_35; Glycosyl hydrolases family 35
    pfam13364
    Location:535 → 604
    BetaGal_dom4_5; Beta-galactosidase jelly roll domain

  3. XM_042244265.2 → XP_042100199.1  beta-galactosidase-1-like protein isoform X2

    Related
    ENSOARP00020015152.1, ENSOART00020018322.2
    Conserved Domains (1) summary
    PLN03059
    Location:31 → 350
    PLN03059; beta-galactosidase; Provisional
Nucleotide Protein Strain
Heading Accession and Version

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