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CLDN10 claudin 10 [ Ovis aries (sheep) ]

Gene ID: 101107876, updated on 8-Mar-2024

Summary

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Gene symbol
CLDN10
Gene description
claudin 10
See related
EnsemblRapid:ENSOARG00020017535
Gene type
protein coding
RefSeq status
MODEL
Organism
Ovis aries
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
Orthologs
human mouse all
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Genomic context

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See CLDN10 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 10 NC_056063.1 (72301847..72322098)

Chromosome 10 - NC_056063.1Genomic Context describing neighboring genes Neighboring gene ATP-binding cassette sub-family C member 4-like Neighboring gene transcription elongation factor A protein 1-like Neighboring gene uncharacterized LOC114116640 Neighboring gene DAZ interacting zinc finger protein 1 Neighboring gene DnaJ heat shock protein family (Hsp40) member C3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056063.1 Chromosome 10 Reference ARS-UI_Ramb_v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bicellular tight junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
claudin-10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UI_Ramb_v3.0 Primary Assembly

Genomic

  1. NC_056063.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Range
    72301847..72322098
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004012203.6 → XP_004012252.1  claudin-10

    See identical proteins and their annotated locations for XP_004012252.1

    UniProtKB/TrEMBL
    A0A6P3EHY6, W5NVE8
    Related
    ENSOARP00020022365.1, ENSOART00020026946.2
    Conserved Domains (1) summary
    pfam00822
    Location:4 → 179
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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