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B3GALNT1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) [ Ovis aries (sheep) ]

Gene ID: 101104544, updated on 10-Oct-2024

Summary

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Gene symbol
B3GALNT1
Gene description
beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)
See related
EnsemblRapid:ENSOARG00020040797
Gene type
protein coding
RefSeq status
MODEL
Organism
Ovis aries
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
Orthologs
human mouse all
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Genomic context

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See B3GALNT1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 1 NC_056054.1 (227035060..227066327)

Chromosome 1 - NC_056054.1Genomic Context describing neighboring genes Neighboring gene astrocytic phosphoprotein PEA-15-like Neighboring gene TRAF family member-associated NF-kappa-B activator-like Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1L Neighboring gene ubiquitin-like protein FUBI Neighboring gene transfer RNA cysteine (anticodon GCA)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056054.1 Chromosome 1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UI_Ramb_v3.0 Primary Assembly

Genomic

  1. NC_056054.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Range
    227035060..227066327
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060394222.1 → XP_060250205.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    A0A6P7D760

  2. XM_060394221.1 → XP_060250204.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    A0A6P7D760

  3. XM_060394235.1 → XP_060250218.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    A0A6P7D760
    Related
    ENSOARP00020059374.1, ENSOART00020047007.1

  4. XM_060394223.1 → XP_060250206.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    A0A6P7D760
    Related
    ENSOARP00020050975.1, ENSOART00020051556.1

  5. XM_027958781.2 → XP_027814582.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    A0A6P7D760, W5PZX5
    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  6. XM_027958771.2 → XP_027814572.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    A0A6P7D760, W5PZX5
    Related
    ENSOARP00020054255.1, ENSOART00020080526.1
    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  7. XM_027958798.2 → XP_027814599.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    A0A6P7D760, W5PZX5
    Related
    ENSOARP00020062686.1, ENSOART00020049732.1
    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  8. XM_027958811.2 → XP_027814612.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    A0A6P7D760, W5PZX5
    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  9. XM_060394231.1 → XP_060250214.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    A0A6P7D760

  10. XM_060394224.1 → XP_060250207.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    A0A6P7D760

  11. XM_060394236.1 → XP_060250219.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    A0A6P7D760

  12. XM_027958774.2 → XP_027814575.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    A0A6P7D760, W5PZX5
    Related
    ENSOARP00020044445.1, ENSOART00020079411.1
    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  13. XM_060394228.1 → XP_060250211.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    A0A6P7D760

  14. XM_027958807.3 → XP_027814608.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    A0A6P7D760, W5PZX5
    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  15. XM_060394227.1 → XP_060250210.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    A0A6P7D760

  16. XM_027958790.3 → XP_027814591.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    A0A6P7D760, W5PZX5
    Related
    ENSOARP00020049832.1, ENSOART00020059701.1
    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

RNA

  1. XR_009595168.1 RNA Sequence

  2. XR_006056771.1 RNA Sequence

  3. XR_009595172.1 RNA Sequence

  4. XR_009595171.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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