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DERA deoxyribose-phosphate aldolase [ Ovis aries (sheep) ]

Gene ID: 101103966, updated on 6-Jun-2024

Summary

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Gene symbol
DERA
Gene description
deoxyribose-phosphate aldolase
See related
EnsemblRapid:ENSOARG00020002180
Gene type
protein coding
RefSeq status
MODEL
Organism
Ovis aries
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 3 NC_056056.1 (199489615..199617155, complement)

Chromosome 3 - NC_056056.1Genomic Context describing neighboring genes Neighboring gene microsomal glutathione S-transferase 1 Neighboring gene solute carrier family 15 member 5 Neighboring gene TATA box-binding protein-associated factor RNA polymerase I subunit D Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene U6 spliceosomal RNA Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene transfer RNA cysteine (anticodon ACA) Neighboring gene serine/threonine kinase receptor associated protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056056.1 Chromosome 3 Reference ARS-UI_Ramb_v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables deoxyribose-phosphate aldolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in deoxyribonucleotide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
deoxyribose-phosphate aldolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UI_Ramb_v3.0 Primary Assembly

Genomic

  1. NC_056056.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Range
    199489615..199617155 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060413363.1 → XP_060269346.1  deoxyribose-phosphate aldolase isoform X4

    UniProtKB/TrEMBL
    W5QHD5
    Related
    ENSOARP00020002763.1, ENSOART00020003323.2

  2. XM_004006820.6 → XP_004006869.4  deoxyribose-phosphate aldolase isoform X2

    UniProtKB/TrEMBL
    W5QHD5
    Related
    ENSOARP00020048206.1, ENSOART00020068019.1
    Conserved Domains (1) summary
    cd00959
    Location:83 → 310
    DeoC; 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family

  3. XM_060413361.1 → XP_060269344.1  deoxyribose-phosphate aldolase isoform X1

    UniProtKB/TrEMBL
    W5QHD5

  4. XM_060413362.1 → XP_060269345.1  deoxyribose-phosphate aldolase isoform X3

    UniProtKB/TrEMBL
    W5QHD5
    Related
    ENSOARP00020002760.2, ENSOART00020003319.2

  5. XM_060413364.1 → XP_060269347.1  deoxyribose-phosphate aldolase isoform X5

    UniProtKB/TrEMBL
    W5QHD5
Nucleotide Protein Strain
Heading Accession and Version

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