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CHI3L1 chitinase 3 like 1 [ Felis catus (domestic cat) ]

Gene ID: 101100781, updated on 17-Aug-2024

Summary

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Official Symbol
CHI3L1
Official Full Name
chitinase 3 like 1
Primary source
VGNC:VGNC:107856
See related
EnsemblRapid:ENSFCTG00005011929
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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See CHI3L1 in Genome Data Viewer
Location:
chromosome: F1
Exon count:
10
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) F1 NC_058384.1 (41595402..41604209, complement)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) F1 NC_018739.3 (43826053..43834909, complement)

Chromosome F1 - NC_058384.1Genomic Context describing neighboring genes Neighboring gene adenosine A1 receptor Neighboring gene myosin binding protein H Neighboring gene uncharacterized LOC102899274 Neighboring gene chitinase 1 Neighboring gene etoposide-induced protein 2.4 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chitin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chitinase-3-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058384.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    41595402..41604209 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019822015.3 → XP_019677574.3  chitinase-3-like protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A2I2UDB3
    Related
    ENSFCTP00005022840.1, ENSFCTT00005033719.1
    Conserved Domains (1) summary
    cd02872
    Location:34 → 390
    GH18_chitolectin_chitotriosidase; This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active ...

  2. XM_003999383.6 → XP_003999432.3  chitinase-3-like protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A2I2UDB3
    Conserved Domains (1) summary
    cd02872
    Location:24 → 380
    GH18_chitolectin_chitotriosidase; This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active ...

  3. XM_019822014.3 → XP_019677573.3  chitinase-3-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A2I2UDB3
    Conserved Domains (1) summary
    cd02872
    Location:30 → 386
    GH18_chitolectin_chitotriosidase; This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active ...
Nucleotide Protein
Heading Accession and Version

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