U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CYP39A1 cytochrome P450 family 39 subfamily A member 1 [ Felis catus (domestic cat) ]

Gene ID: 101100564, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
CYP39A1
Official Full Name
cytochrome P450 family 39 subfamily A member 1
Primary source
VGNC:VGNC:103343
See related
EnsemblRapid:ENSFCTG00005018383
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CYP39A1 in Genome Data Viewer
Location:
chromosome: B2
Exon count:
14
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) B2 NC_058372.1 (44262658..44358346, complement)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) B2 NC_018727.3 (47135719..47230355, complement)

Chromosome B2 - NC_058372.1Genomic Context describing neighboring genes Neighboring gene ectonucleotide pyrophosphatase/phosphodiesterase family member 5 Neighboring gene regulator of calcineurin 2 Neighboring gene heat shock cognate 71 kDa protein-like Neighboring gene U6 spliceosomal RNA Neighboring gene solute carrier family 25 member 27 Neighboring gene tudor domain containing 6

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables steroid hydroxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bile acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cholesterol homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
24-hydroxycholesterol 7-alpha-hydroxylase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058372.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    44262658..44358346 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003986216.6 → XP_003986265.1  24-hydroxycholesterol 7-alpha-hydroxylase

    UniProtKB/TrEMBL
    M3WEE2
    Related
    ENSFCTP00005039212.1, ENSFCTT00005053367.1
    Conserved Domains (1) summary
    cl12078
    Location:27 → 420
    p450; Cytochrome P450

RNA

  1. XR_006597807.1 RNA Sequence

  2. XR_006597808.1 RNA Sequence

    Related
    ENSFCTT00005052828.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.