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TSPAN3 tetraspanin 3 [ Felis catus (domestic cat) ]

Gene ID: 101100473, updated on 8-Mar-2024

Summary

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Gene symbol
TSPAN3
Gene description
tetraspanin 3
See related
EnsemblRapid:ENSFCTG00005010112
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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See TSPAN3 in Genome Data Viewer
Location:
chromosome: B3
Exon count:
7
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) B3 NC_058373.1 (29881816..29911192, complement)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) B3 NC_018728.3 (31984656..32013983, complement)

Chromosome B3 - NC_058373.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123385847 Neighboring gene proline-serine-threonine phosphatase interacting protein 1 Neighboring gene uncharacterized LOC102900282 Neighboring gene pseudopodium enriched atypical kinase 1 Neighboring gene 60 kDa heat shock protein, mitochondrial-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein localization to plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein maturation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of vascular endothelial growth factor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tetraspanin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058373.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    29881816..29911192 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023255049.2 → XP_023110817.1  tetraspanin-3

    UniProtKB/TrEMBL
    A0A2I2UDW9
    Related
    ENSFCTP00005018468.1, ENSFCTT00005028353.1
    Conserved Domains (2) summary
    cd03163
    Location:104 → 210
    TM4SF8_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF8_like subfamily. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
    pfam00335
    Location:9 → 232
    Tetraspannin; Tetraspanin family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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