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GPC2 glypican 2 [ Felis catus (domestic cat) ]

Gene ID: 101098914, updated on 17-Aug-2024

Summary

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Official Symbol
GPC2
Official Full Name
glypican 2
Primary source
VGNC:VGNC:67404
See related
EnsemblRapid:ENSFCTG00005004738
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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See GPC2 in Genome Data Viewer
Location:
chromosome: E3
Exon count:
11
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) E3 NC_058383.1 (7425230..7432128, complement)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) E3 NC_018738.3 (7491356..7498004, complement)

Chromosome E3 - NC_058383.1Genomic Context describing neighboring genes Neighboring gene trafficking protein particle complex subunit 14 Neighboring gene galactose-3-O-sulfotransferase 4 Neighboring gene STAG3 cohesin complex component Neighboring gene PVR related immunoglobulin domain containing Neighboring gene uncharacterized LOC109495132 Neighboring gene paired immunoglobin like type 2 receptor alpha

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of protein localization to membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in smoothened signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glypican-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058383.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    7425230..7432128 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023247047.2 → XP_023102815.2  glypican-2

    UniProtKB/TrEMBL
    M3WDY2
    Related
    ENSFCTP00005008368.1, ENSFCTT00005012928.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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