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CD44 CD44 molecule [ Felis catus (domestic cat) ]

Gene ID: 101098744, updated on 17-Aug-2024

Summary

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Official Symbol
CD44
Official Full Name
CD44 molecule
Primary source
VGNC:VGNC:81993
See related
EnsemblRapid:ENSFCTG00005017153
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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See CD44 in Genome Data Viewer
Location:
chromosome: D1
Exon count:
18
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) D1 NC_058377.1 (88906223..88997659)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) D1 NC_018732.3 (90920013..91011461)

Chromosome D1 - NC_058377.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109492091 Neighboring gene uncharacterized LOC109492093 Neighboring gene uncharacterized LOC109492094 Neighboring gene uncharacterized LOC123380570 Neighboring gene uncharacterized LOC123380571 Neighboring gene solute carrier family 1 member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hyaluronic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of ERK1 and ERK2 cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in basolateral plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of macrophage migration inhibitory factor receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CD44 antigen
Names
CD44 molecule (Indian blood group)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058377.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    88906223..88997659
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019812260.3 → XP_019667819.3  CD44 antigen isoform X1

    UniProtKB/TrEMBL
    A0A337SMK2
    Related
    ENSFCTP00005036376.1, ENSFCTT00005049977.1
    Conserved Domains (1) summary
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  2. XM_019812261.3 → XP_019667820.3  CD44 antigen isoform X2

    UniProtKB/TrEMBL
    A0A337SMK2
    Related
    ENSFCTP00005036051.1, ENSFCTT00005049600.1
    Conserved Domains (1) summary
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  3. XM_019812264.3 → XP_019667823.3  CD44 antigen isoform X4

    UniProtKB/TrEMBL
    A0A337SMK2
    Conserved Domains (1) summary
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  4. XM_019812263.3 → XP_019667822.3  CD44 antigen isoform X3

    UniProtKB/TrEMBL
    A0A337SMK2
    Related
    ENSFCTP00005036518.1, ENSFCTT00005050147.1
    Conserved Domains (1) summary
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  5. XM_019812268.3 → XP_019667827.3  CD44 antigen isoform X6

    UniProtKB/TrEMBL
    A0A337SMK2
    Conserved Domains (2) summary
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...
    NF012181
    Location:321 → 564
    MSCRAMM_SdrD; MSCRAMM family adhesin SdrD

  6. XM_019812266.3 → XP_019667825.2  CD44 antigen isoform X5

    UniProtKB/TrEMBL
    A0A337SMK2
    Conserved Domains (1) summary
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  7. XM_011286808.4 → XP_011285110.2  CD44 antigen isoform X7

    UniProtKB/TrEMBL
    A0A337SMK2
    Related
    ENSFCTP00005035912.1, ENSFCTT00005049446.1
    Conserved Domains (1) summary
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  8. XM_019812269.3 → XP_019667828.3  CD44 antigen isoform X8

    UniProtKB/TrEMBL
    A0A337SMK2
    Conserved Domains (1) summary
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  9. XM_019812270.3 → XP_019667829.2  CD44 antigen isoform X9

    UniProtKB/TrEMBL
    M3W4X0
    Related
    ENSFCTP00005036761.1, ENSFCTT00005050427.1
    Conserved Domains (1) summary
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  10. XM_019812271.3 → XP_019667830.3  CD44 antigen isoform X10

    UniProtKB/TrEMBL
    A0A337SMK2
    Conserved Domains (1) summary
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  11. XM_045039135.1 → XP_044895070.1  CD44 antigen isoform X11

    Conserved Domains (1) summary
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  12. XM_011286809.4 → XP_011285111.2  CD44 antigen isoform X12

    UniProtKB/TrEMBL
    M3W4X0
    Related
    ENSFCTP00005036904.1, ENSFCTT00005050592.1
    Conserved Domains (2) summary
    PHA03307
    Location:196 → 448
    PHA03307; transcriptional regulator ICP4; Provisional
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  13. XM_045039136.1 → XP_044895071.1  CD44 antigen isoform X13

    UniProtKB/TrEMBL
    A0A2I2UH63
    Conserved Domains (1) summary
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  14. XM_045039137.1 → XP_044895072.1  CD44 antigen isoform X14

    UniProtKB/TrEMBL
    A0A337S5E8
    Conserved Domains (1) summary
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  15. XM_019812273.3 → XP_019667832.2  CD44 antigen isoform X15

    UniProtKB/TrEMBL
    A0A5F5Y0M0
    Conserved Domains (1) summary
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  16. XM_019812274.3 → XP_019667833.2  CD44 antigen isoform X17

    UniProtKB/TrEMBL
    A0A337SF56
    Conserved Domains (1) summary
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...

  17. XM_011286810.4 → XP_011285112.2  CD44 antigen isoform X16

    UniProtKB/TrEMBL
    A0A337S5E8
    Conserved Domains (1) summary
    cd03516
    Location:26 → 170
    Link_domain_CD44_like; This domain is a hyaluronan (HA)-binding domain. It is found in CD44 receptor and mediates adhesive interactions during inflammatory leukocyte homing and tumor metastasis. It also plays an important role in arteriogenesis. The functional HA-binding ...
Nucleotide Protein
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