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SLC39A5 solute carrier family 39 member 5 [ Felis catus (domestic cat) ]

Gene ID: 101097567, updated on 17-Aug-2024

Summary

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Official Symbol
SLC39A5
Official Full Name
solute carrier family 39 member 5
Primary source
VGNC:VGNC:65361
See related
EnsemblRapid:ENSFCTG00005025057
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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See SLC39A5 in Genome Data Viewer
Location:
chromosome: B4
Exon count:
12
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) B4 NC_058374.1 (82741511..82747205)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) B4 NC_018729.3 (84867376..84873073)

Chromosome B4 - NC_058374.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 41 Neighboring gene HIG1 domain family member 2A-like Neighboring gene nucleic acid binding protein 2 Neighboring gene ankyrin repeat domain 52 Neighboring gene coenzyme Q10A Neighboring gene citrate synthase Neighboring gene uncharacterized LOC123386614 Neighboring gene canopy FGF signaling regulator 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in BMP signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular zinc ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in zinc ion import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc transporter ZIP5
Names
solute carrier family 39 (metal ion transporter), member 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058374.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    82741511..82747205
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019835070.3 → XP_019690629.1  zinc transporter ZIP5

    UniProtKB/TrEMBL
    M3WG65
    Related
    ENSFCTP00005050552.1, ENSFCTT00005071172.1
    Conserved Domains (1) summary
    pfam02535
    Location:247 → 506
    Zip; ZIP Zinc transporter
Nucleotide Protein
Heading Accession and Version

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