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ATP5PD ATP synthase peripheral stalk subunit d [ Felis catus (domestic cat) ]

Gene ID: 101097436, updated on 18-Sep-2024

Summary

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Official Symbol
ATP5PD
Official Full Name
ATP synthase peripheral stalk subunit d
Primary source
VGNC:VGNC:97364
See related
EnsemblRapid:ENSFCTG00005032054
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Also known as
ATP5H
Orthologs
human mouse all
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Genomic context

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See ATP5PD in Genome Data Viewer
Location:
chromosome: E1
Exon count:
7
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) E1 NC_058381.1 (55511081..55516531, complement)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) E1 NC_018736.3 (57100245..57105686, complement)

Chromosome E1 - NC_058381.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109494460 Neighboring gene transfer RNA arginine (anticodon UCG) Neighboring gene transfer RNA arginine (anticodon CCU) Neighboring gene uncharacterized LOC123381862 Neighboring gene E3 ubiquitin/ISG15 ligase TRIM25-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequencing and comparative genomic analysis of 1227 Felis catus cDNA sequences enriched for developmental, clinical and nutritional phenotypes. Irizarry KJ, et al. BMC Genomics, 2012 Jan 18. PMID 22257742, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables proton transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton motive force-driven ATP synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP synthase subunit d, mitochondrial
Names
ATP synthase, H+ transporting, mitochondrial Fo complex subunit D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058381.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    55511081..55516531 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003997138.6 → XP_003997187.1  ATP synthase subunit d, mitochondrial

    See identical proteins and their annotated locations for XP_003997187.1

    UniProtKB/TrEMBL
    A0A337SD82, M3XC82
    Related
    ENSFCTP00005059868.1, ENSFCTT00005088826.1
    Conserved Domains (1) summary
    pfam05873
    Location:3 → 155
    Mt_ATP-synt_D; ATP synthase D chain, mitochondrial (ATP5H)

  2. XM_045044253.1 → XP_044900188.1  ATP synthase subunit d, mitochondrial

    UniProtKB/TrEMBL
    A0A337SD82, M3XC82
    Conserved Domains (1) summary
    pfam05873
    Location:3 → 155
    Mt_ATP-synt_D; ATP synthase D chain, mitochondrial (ATP5H)
Nucleotide Protein
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Gene LinkOut

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