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CLDN10 claudin 10 [ Felis catus (domestic cat) ]

Gene ID: 101096533, updated on 17-Aug-2024

Summary

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Official Symbol
CLDN10
Official Full Name
claudin 10
Primary source
VGNC:VGNC:102180
See related
EnsemblRapid:ENSFCTG00005014103
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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See CLDN10 in Genome Data Viewer
Location:
chromosome: A1
Exon count:
6
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) A1 NC_058368.1 (67256259..67371091)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) A1 NC_018723.3 (67431562..67546762)

Chromosome A1 - NC_058368.1Genomic Context describing neighboring genes Neighboring gene ATP binding cassette subfamily C member 4 Neighboring gene uncharacterized LOC111560130 Neighboring gene uncharacterized LOC123384688 Neighboring gene uncharacterized LOC123384700 Neighboring gene DAZ interacting zinc finger protein 1 Neighboring gene guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5-like Neighboring gene DnaJ heat shock protein family (Hsp40) member C3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bicellular tight junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
claudin-10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058368.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    67256259..67371091
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003980480.6 → XP_003980529.1  claudin-10 isoform X2

    See identical proteins and their annotated locations for XP_003980529.1

    UniProtKB/TrEMBL
    A0A337SV17
    Related
    ENSFCTP00005028397.1, ENSFCTT00005040240.1
    Conserved Domains (1) summary
    cl21598
    Location:9 → 177
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

  2. XM_019828594.3 → XP_019684153.1  claudin-10 isoform X3

    Conserved Domains (1) summary
    cl21598
    Location:9 → 158
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

  3. XM_023252668.2 → XP_023108436.1  claudin-10 isoform X4

    Conserved Domains (1) summary
    cl21598
    Location:4 → 160
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

  4. XM_023252663.2 → XP_023108431.1  claudin-10 isoform X1

    UniProtKB/TrEMBL
    A0A2I2UQA0
    Related
    ENSFCTP00005028449.1, ENSFCTT00005040301.1
    Conserved Domains (1) summary
    pfam00822
    Location:4 → 179
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family
Nucleotide Protein
Heading Accession and Version

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