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TCEA2 transcription elongation factor A2 [ Felis catus (domestic cat) ]

Gene ID: 101094496, updated on 17-Aug-2024

Summary

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Official Symbol
TCEA2
Official Full Name
transcription elongation factor A2
Primary source
VGNC:VGNC:66015
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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See TCEA2 in Genome Data Viewer
Location:
chromosome: A3
Exon count:
10
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) A3 NC_058370.1 (334517..343008, complement)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) A3 NC_018725.3 (504913..513357, complement)

Chromosome A3 - NC_058370.1Genomic Context describing neighboring genes Neighboring gene opioid related nociceptin receptor 1 Neighboring gene LKAAEAR motif containing 1 Neighboring gene regulator of G protein signaling 19 Neighboring gene SRY-box transcription factor 18 Neighboring gene chromosome A3 C20orf204 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription elongation factor A protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058370.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    334517..343008 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006929567.5 → XP_006929629.2  transcription elongation factor A protein 2 isoform X2

    Conserved Domains (1) summary
    TIGR01385
    Location:6 → 299
    TFSII; transcription elongation factor S-II

  2. XM_003983289.6 → XP_003983338.3  transcription elongation factor A protein 2 isoform X1

    UniProtKB/TrEMBL
    M3X010
    Conserved Domains (1) summary
    TIGR01385
    Location:6 → 300
    TFSII; transcription elongation factor S-II
Nucleotide Protein
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