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TSPAN1 tetraspanin 1 [ Felis catus (domestic cat) ]

Gene ID: 101093789, updated on 17-Aug-2024

Summary

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Official Symbol
TSPAN1
Official Full Name
tetraspanin 1
Primary source
VGNC:VGNC:66624
See related
EnsemblRapid:ENSFCTG00005027760
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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See TSPAN1 in Genome Data Viewer
Location:
chromosome: C1
Exon count:
8
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) C1 NC_058375.1 (36677472..36682387)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) C1 NC_018730.3 (36948442..36953325)

Chromosome C1 - NC_058375.1Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol 3-kinase regulatory subunit gamma Neighboring gene PIK3R3 upstream open reading frame Neighboring gene protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) Neighboring gene leucine rich adaptor protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tetraspanin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058375.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    36677472..36682387
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019836921.3 → XP_019692480.1  tetraspanin-1

    UniProtKB/TrEMBL
    M3VUZ7
    Related
    ENSFCTP00005054796.1, ENSFCTT00005078449.1
    Conserved Domains (1) summary
    pfam00335
    Location:7 → 236
    Tetraspannin; Tetraspanin family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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