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PES1 pescadillo ribosomal biogenesis factor 1 [ Felis catus (domestic cat) ]

Gene ID: 101093053, updated on 17-Aug-2024

Summary

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Official Symbol
PES1
Official Full Name
pescadillo ribosomal biogenesis factor 1
Primary source
VGNC:VGNC:68788
See related
EnsemblRapid:ENSFCTG00005025321
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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See PES1 in Genome Data Viewer
Location:
chromosome: D3
Exon count:
15
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) D3 NC_058379.1 (22334907..22348778)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) D3 NC_018734.3 (22406672..22420513)

Chromosome D3 - NC_058379.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 35 member E4 Neighboring gene transcobalamin 2 Neighboring gene galactose-3-O-sulfotransferase 1 Neighboring gene putative SEC14-like protein 6 Neighboring gene SEC14 like lipid binding 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of PeBoW complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pescadillo homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058379.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    22334907..22348778
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003994796.6 → XP_003994845.3  pescadillo homolog isoform X1

    UniProtKB/TrEMBL
    M3WQ42
    Related
    ENSFCTP00005051072.1, ENSFCTT00005072059.1
    Conserved Domains (1) summary
    COG5163
    Location:6 → 580
    NOP7; Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis]

  2. XM_019814771.3 → XP_019670330.3  pescadillo homolog isoform X2

    UniProtKB/TrEMBL
    M3WQ42
    Conserved Domains (1) summary
    COG5163
    Location:6 → 582
    NOP7; Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

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