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RPS27A ribosomal protein S27a [ Felis catus (domestic cat) ]

Gene ID: 101092929, updated on 17-Aug-2024

Summary

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Official Symbol
RPS27A
Official Full Name
ribosomal protein S27a
Primary source
VGNC:VGNC:64752
See related
EnsemblRapid:ENSFCTG00005000488
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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See RPS27A in Genome Data Viewer
Location:
chromosome: A3
Exon count:
6
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) A3 NC_058370.1 (73879610..73882302)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) A3 NC_018725.3 (76378202..76380889)

Chromosome A3 - NC_058370.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S18-like Neighboring gene clathrin heavy chain linker domain containing 1 Neighboring gene mitochondrial translational initiation factor 2 Neighboring gene prolyl-tRNA synthetase associated domain-containing protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tag activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in modification-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin-40S ribosomal protein S27a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058370.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    73879610..73882302
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003984008.6 → XP_003984057.1  ubiquitin-40S ribosomal protein S27a

    See identical proteins and their annotated locations for XP_003984057.1

    UniProtKB/TrEMBL
    M3WWF6
    Related
    ENSFCTP00005000548.1, ENSFCTT00005001244.1
    Conserved Domains (2) summary
    cd01803
    Location:1 → 76
    Ubl_ubiquitin; ubiquitin-like (Ubl) domain found in ubiquitin
    pfam01599
    Location:103 → 147
    Ribosomal_S27; Ribosomal protein S27a
Nucleotide Protein
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