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PSD2 pleckstrin and Sec7 domain containing 2 [ Felis catus (domestic cat) ]

Gene ID: 101092581, updated on 17-Aug-2024

Summary

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Official Symbol
PSD2
Official Full Name
pleckstrin and Sec7 domain containing 2
Primary source
VGNC:VGNC:102297
See related
EnsemblRapid:ENSFCTG00005025133
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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See PSD2 in Genome Data Viewer
Location:
chromosome: A1
Exon count:
19
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) A1 NC_058368.1 (115724780..115781350)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) A1 NC_018723.3 (118122376..118171843)

Chromosome A1 - NC_058368.1Genomic Context describing neighboring genes Neighboring gene ubiquitin conjugating enzyme E2 D2 Neighboring gene CXXC finger protein 5 Neighboring gene uncharacterized LOC123386070 Neighboring gene neuregulin 2 Neighboring gene uncharacterized LOC109500856

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of ARF protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
PH and SEC7 domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058368.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    115724780..115781350
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045059883.1 → XP_044915818.1  PH and SEC7 domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A2I2V3Y6
    Conserved Domains (2) summary
    cd00171
    Location:306 → 474
    Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
    cd13295
    Location:520 → 643
    PH_EFA6; Exchange Factor for ARF6 Pleckstrin homology (PH) domain

  2. XM_045059878.1 → XP_044915813.1  PH and SEC7 domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A2I2V3Y6
    Conserved Domains (2) summary
    cd00171
    Location:306 → 474
    Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
    cd13295
    Location:520 → 643
    PH_EFA6; Exchange Factor for ARF6 Pleckstrin homology (PH) domain

  3. XM_045059880.1 → XP_044915815.1  PH and SEC7 domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A2I2V3Y6
    Conserved Domains (2) summary
    cd00171
    Location:306 → 474
    Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
    cd13295
    Location:520 → 643
    PH_EFA6; Exchange Factor for ARF6 Pleckstrin homology (PH) domain

  4. XM_045059886.1 → XP_044915821.1  PH and SEC7 domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A2I2V3Y6
    Conserved Domains (2) summary
    cd00171
    Location:306 → 474
    Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
    cd13295
    Location:520 → 643
    PH_EFA6; Exchange Factor for ARF6 Pleckstrin homology (PH) domain

  5. XM_045059889.1 → XP_044915824.1  PH and SEC7 domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A2I2V3Y6
    Conserved Domains (2) summary
    cd00171
    Location:306 → 474
    Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
    cd13295
    Location:520 → 643
    PH_EFA6; Exchange Factor for ARF6 Pleckstrin homology (PH) domain

  6. XM_019833014.3 → XP_019688573.3  PH and SEC7 domain-containing protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A2I2V3Y6
    Related
    ENSFCTP00005051108.1, ENSFCTT00005072120.1
    Conserved Domains (2) summary
    cd00171
    Location:306 → 473
    Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
    cd13295
    Location:519 → 642
    PH_EFA6; Exchange Factor for ARF6 Pleckstrin homology (PH) domain

  7. XM_045059881.1 → XP_044915816.1  PH and SEC7 domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A2I2V3Y6
    Conserved Domains (2) summary
    cd00171
    Location:306 → 474
    Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
    cd13295
    Location:520 → 643
    PH_EFA6; Exchange Factor for ARF6 Pleckstrin homology (PH) domain
Nucleotide Protein
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