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WDR3 WD repeat domain 3 [ Felis catus (domestic cat) ]

Gene ID: 101090282, updated on 17-Aug-2024

Summary

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Official Symbol
WDR3
Official Full Name
WD repeat domain 3
Primary source
VGNC:VGNC:67024
See related
EnsemblRapid:ENSFCTG00005019733
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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See WDR3 in Genome Data Viewer
Location:
chromosome: C1
Exon count:
29
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) C1 NC_058375.1 (100859099..100890457)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) C1 NC_018730.3 (101345548..101377107)

Chromosome C1 - NC_058375.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123379027 Neighboring gene ganglioside induced differentiation associated protein 2 Neighboring gene sperm associated antigen 17 Neighboring gene uncharacterized LOC123379030 Neighboring gene uncharacterized LOC123379029

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables snoRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of SSU-rRNA IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Pwp2p-containing subcomplex of 90S preribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small-subunit processome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WD repeat-containing protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058375.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    100859099..100890457
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011285092.3 → XP_011283394.1  WD repeat-containing protein 3 isoform X1

    Conserved Domains (4) summary
    cd00200
    Location:407 → 703
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:462 → 494
    7WD40; WD40 repeat [structural motif]
    pfam04003
    Location:804 → 907
    Utp12; Dip2/Utp12 Family
    cl29593
    Location:47 → 230
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_045033357.1 → XP_044889292.1  WD repeat-containing protein 3 isoform X1

    Related
    ENSFCTP00005041986.1, ENSFCTT00005057128.1
    Conserved Domains (4) summary
    cd00200
    Location:407 → 703
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:462 → 494
    7WD40; WD40 repeat [structural motif]
    pfam04003
    Location:804 → 907
    Utp12; Dip2/Utp12 Family
    cl29593
    Location:47 → 230
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  3. XM_023259043.2 → XP_023114811.1  WD repeat-containing protein 3 isoform X2

    UniProtKB/TrEMBL
    M3W0E3
    Related
    ENSFCTP00005042189.1, ENSFCTT00005057435.1
    Conserved Domains (4) summary
    cd00200
    Location:425 → 721
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:480 → 512
    7WD40; WD40 repeat [structural motif]
    pfam04003
    Location:822 → 925
    Utp12; Dip2/Utp12 Family
    cl25539
    Location:65 → 248
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  4. XM_011285091.4 → XP_011283393.2  WD repeat-containing protein 3 isoform X1

    Conserved Domains (4) summary
    cd00200
    Location:407 → 703
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:462 → 494
    7WD40; WD40 repeat [structural motif]
    pfam04003
    Location:804 → 907
    Utp12; Dip2/Utp12 Family
    cl29593
    Location:47 → 230
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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