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TEFM transcription elongation factor, mitochondrial [ Felis catus (domestic cat) ]

Gene ID: 101090058, updated on 17-Aug-2024

Summary

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Official Symbol
TEFM
Official Full Name
transcription elongation factor, mitochondrial
Primary source
VGNC:VGNC:66063
See related
EnsemblRapid:ENSFCTG00005027295
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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See TEFM in Genome Data Viewer
Location:
chromosome: E1
Exon count:
4
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) E1 NC_058381.1 (20115259..20122246, complement)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) E1 NC_018736.3 (20157251..20163954, complement)

Chromosome E1 - NC_058381.1Genomic Context describing neighboring genes Neighboring gene cytokine receptor like factor 3 Neighboring gene ATPase family AAA domain containing 5 Neighboring gene high mobility group protein B1-like Neighboring gene ArfGAP with dual PH domains 2 Neighboring gene 60S ribosomal protein L13a-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA polymerase processivity factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription elongation by mitochondrial RNA polymerase IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial nucleoid IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription elongation factor, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058381.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    20115259..20122246 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006940055.4 → XP_006940117.2  transcription elongation factor, mitochondrial isoform X3

    UniProtKB/TrEMBL
    M3WUU3
    Related
    ENSFCTP00005054007.1, ENSFCTT00005077133.1
    Conserved Domains (2) summary
    cl39090
    Location:74 → 125
    ComEA; DNA uptake protein ComE and related DNA-binding proteins [Replication, recombination and repair]
    cl21482
    Location:164 → 359
    RuvC_like; Crossover junction endodeoxyribonuclease RuvC and similar proteins

  2. XM_003996533.5 → XP_003996582.2  transcription elongation factor, mitochondrial isoform X1

    UniProtKB/TrEMBL
    M3WUU3
    Conserved Domains (2) summary
    cl39090
    Location:67 → 118
    ComEA; DNA uptake protein ComE and related DNA-binding proteins [Replication, recombination and repair]
    cl21482
    Location:157 → 352
    RuvC_like; Crossover junction endodeoxyribonuclease RuvC and similar proteins

  3. XM_006940056.4 → XP_006940118.2  transcription elongation factor, mitochondrial isoform X2

    UniProtKB/TrEMBL
    M3WUU3
    Conserved Domains (2) summary
    COG2183
    Location:84 → 194
    Tex; Transcriptional accessory protein Tex/SPT6 [Transcription]
    cl39090
    Location:74 → 125
    ComEA; DNA uptake protein ComE and related DNA-binding proteins [Replication, recombination and repair]
Nucleotide Protein
Heading Accession and Version

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