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CFAP43 cilia and flagella associated protein 43 [ Felis catus (domestic cat) ]

Gene ID: 101089897, updated on 17-Aug-2024

Summary

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Official Symbol
CFAP43
Official Full Name
cilia and flagella associated protein 43
Primary source
VGNC:VGNC:60813
See related
EnsemblRapid:ENSFCTG00005002119
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Also known as
WDR96
Orthologs
human mouse all
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Genomic context

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See CFAP43 in Genome Data Viewer
Location:
chromosome: D2
Exon count:
39
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) D2 NC_058378.1 (62223923..62353252, complement)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) D2 NC_018733.3 (64402485..64524827, complement)

Chromosome D2 - NC_058378.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123380897 Neighboring gene collagen type XVII alpha 1 chain Neighboring gene uncharacterized LOC109492673 Neighboring gene SWI5 dependent homologous recombination repair protein 1 Neighboring gene U2 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC109492674 Neighboring gene glutathione S-transferase omega 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sperm axoneme assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axoneme IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cilia- and flagella-associated protein 43
Names
WD repeat domain 96

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058378.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    62223923..62353252 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045040642.1 → XP_044896577.1  cilia- and flagella-associated protein 43 isoform X5

    UniProtKB/TrEMBL
    M3WF98
    Related
    ENSFCTP00005003437.1, ENSFCTT00005005588.1
    Conserved Domains (2) summary
    COG1196
    Location:642 → 1472
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    COG2319
    Location:251 → 462
    WD40; WD40 repeat [General function prediction only]

  2. XM_023240892.2 → XP_023096660.1  cilia- and flagella-associated protein 43 isoform X3

    UniProtKB/TrEMBL
    M3WF98
    Related
    ENSFCTP00005003412.1, ENSFCTT00005005563.1
    Conserved Domains (1) summary
    cl25732
    Location:666 → 1496
    SMC_N; RecF/RecN/SMC N terminal domain

  3. XM_023240891.2 → XP_023096659.1  cilia- and flagella-associated protein 43 isoform X2

    UniProtKB/TrEMBL
    M3WF98
    Conserved Domains (2) summary
    COG2319
    Location:314 → 525
    WD40; WD40 repeat [General function prediction only]
    cl25732
    Location:705 → 1500
    SMC_N; RecF/RecN/SMC N terminal domain

  4. XM_023240893.2 → XP_023096661.1  cilia- and flagella-associated protein 43 isoform X4

    UniProtKB/TrEMBL
    M3WF98
    Related
    ENSFCTP00005003401.1, ENSFCTT00005005552.1
    Conserved Domains (2) summary
    COG2319
    Location:314 → 525
    WD40; WD40 repeat [General function prediction only]
    cl25732
    Location:795 → 1380
    SMC_N; RecF/RecN/SMC N terminal domain

  5. XM_006938157.5 → XP_006938219.3  cilia- and flagella-associated protein 43 isoform X1

    UniProtKB/TrEMBL
    M3WF98
    Related
    ENSFCTP00005003429.1, ENSFCTT00005005580.1
    Conserved Domains (2) summary
    COG2319
    Location:314 → 525
    WD40; WD40 repeat [General function prediction only]
    cl25732
    Location:705 → 1535
    SMC_N; RecF/RecN/SMC N terminal domain

  6. XM_045040645.1 → XP_044896580.1  cilia- and flagella-associated protein 43 isoform X8

    UniProtKB/TrEMBL
    M3WF98
    Conserved Domains (2) summary
    COG1196
    Location:397 → 1152
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    COG2319
    Location:6 → 217
    WD40; WD40 repeat [General function prediction only]

  7. XM_045040643.1 → XP_044896578.1  cilia- and flagella-associated protein 43 isoform X6

    UniProtKB/TrEMBL
    M3WF98
    Conserved Domains (2) summary
    COG1196
    Location:705 → 1535
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    COG2319
    Location:314 → 525
    WD40; WD40 repeat [General function prediction only]

  8. XM_045040644.1 → XP_044896579.1  cilia- and flagella-associated protein 43 isoform X7

    Conserved Domains (2) summary
    COG0419
    Location:795 → 1313
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    COG2319
    Location:314 → 525
    WD40; WD40 repeat [General function prediction only]
Nucleotide Protein
Heading Accession and Version

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