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SGCD sarcoglycan delta [ Felis catus (domestic cat) ]

Gene ID: 101089742, updated on 17-Aug-2024

Summary

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Official Symbol
SGCD
Official Full Name
sarcoglycan delta
Primary source
VGNC:VGNC:102315
See related
EnsemblRapid:ENSFCTG00005006619
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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See SGCD in Genome Data Viewer
Location:
chromosome: A1
Exon count:
14
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) A1 NC_058368.1 (190648765..191595538, complement)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) A1 NC_018723.3 (193281183..194228308, complement)

Chromosome A1 - NC_058368.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123379753 Neighboring gene T cell immunoglobulin and mucin domain containing 4 Neighboring gene uncharacterized LOC123379765 Neighboring gene U2 spliceosomal RNA Neighboring gene U4 spliceosomal RNA Neighboring gene uncharacterized LOC123385190 Neighboring gene uncharacterized LOC123379770

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058368.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    190648765..191595538 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019839908.3 → XP_019695467.1  delta-sarcoglycan isoform X1

    UniProtKB/TrEMBL
    M3WRZ6
    Conserved Domains (1) summary
    pfam04790
    Location:23 → 278
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  2. XM_045036411.1 → XP_044892346.1  delta-sarcoglycan isoform X1

    UniProtKB/TrEMBL
    M3WRZ6
    Conserved Domains (1) summary
    pfam04790
    Location:23 → 278
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  3. XM_045036400.1 → XP_044892335.1  delta-sarcoglycan isoform X1

    UniProtKB/TrEMBL
    M3WRZ6
    Conserved Domains (1) summary
    pfam04790
    Location:23 → 278
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  4. XM_045036405.1 → XP_044892340.1  delta-sarcoglycan isoform X1

    UniProtKB/TrEMBL
    M3WRZ6
    Conserved Domains (1) summary
    pfam04790
    Location:23 → 278
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  5. XM_019839916.3 → XP_019695475.1  delta-sarcoglycan isoform X1

    UniProtKB/TrEMBL
    M3WRZ6
    Related
    ENSFCTP00005012299.1, ENSFCTT00005018416.1
    Conserved Domains (1) summary
    pfam04790
    Location:23 → 278
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  6. XM_019839924.3 → XP_019695483.1  delta-sarcoglycan isoform X2

    Conserved Domains (1) summary
    pfam04790
    Location:23 → 236
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  7. XM_011285858.4 → XP_011284160.1  delta-sarcoglycan isoform X1

    See identical proteins and their annotated locations for XP_011284160.1

    UniProtKB/TrEMBL
    M3WRZ6
    Conserved Domains (1) summary
    pfam04790
    Location:23 → 278
    Sarcoglycan_1; Sarcoglycan complex subunit protein
Nucleotide Protein
Heading Accession and Version

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