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SGMS2 sphingomyelin synthase 2 [ Felis catus (domestic cat) ]

Gene ID: 101088574, updated on 17-Aug-2024

Summary

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Official Symbol
SGMS2
Official Full Name
sphingomyelin synthase 2
Primary source
VGNC:VGNC:65081
See related
EnsemblRapid:ENSFCTG00005022522
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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See SGMS2 in Genome Data Viewer
Location:
chromosome: B1
Exon count:
10
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) B1 NC_058371.1 (114853956..114940631, complement)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) B1 NC_018726.3 (117243201..117422023, complement)

Chromosome B1 - NC_058371.1Genomic Context describing neighboring genes Neighboring gene hydroxyacyl-CoA dehydrogenase Neighboring gene cytochrome P450 family 2 subfamily U member 1 Neighboring gene cytochrome b-c1 complex subunit 7-like Neighboring gene 3'-phosphoadenosine 5'-phosphosulfate synthase 1 Neighboring gene uncharacterized LOC123384994 Neighboring gene uncharacterized LOC123384992

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ceramide cholinephosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sphingomyelin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingomyelin biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylcholine:ceramide cholinephosphotransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058371.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    114853956..114940631 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045056029.1 → XP_044911964.1  phosphatidylcholine:ceramide cholinephosphotransferase 2

    UniProtKB/TrEMBL
    M3WGN5
    Conserved Domains (2) summary
    COG5038
    Location:6 → 175
    COG5038; Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only]
    pfam14360
    Location:220 → 293
    PAP2_C; PAP2 superfamily C-terminal

  2. XM_019829136.3 → XP_019684695.1  phosphatidylcholine:ceramide cholinephosphotransferase 2

    UniProtKB/TrEMBL
    M3WGN5
    Related
    ENSFCTP00005046773.1, ENSFCTT00005064420.1
    Conserved Domains (2) summary
    COG5038
    Location:6 → 175
    COG5038; Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only]
    pfam14360
    Location:220 → 293
    PAP2_C; PAP2 superfamily C-terminal

  3. XM_023252878.2 → XP_023108646.1  phosphatidylcholine:ceramide cholinephosphotransferase 2

    UniProtKB/TrEMBL
    M3WGN5
    Conserved Domains (2) summary
    COG5038
    Location:6 → 175
    COG5038; Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only]
    pfam14360
    Location:220 → 293
    PAP2_C; PAP2 superfamily C-terminal

  4. XM_019829135.3 → XP_019684694.1  phosphatidylcholine:ceramide cholinephosphotransferase 2

    UniProtKB/TrEMBL
    M3WGN5
    Conserved Domains (2) summary
    COG5038
    Location:6 → 175
    COG5038; Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only]
    pfam14360
    Location:220 → 293
    PAP2_C; PAP2 superfamily C-terminal

  5. XM_019829139.3 → XP_019684698.1  phosphatidylcholine:ceramide cholinephosphotransferase 2

    UniProtKB/TrEMBL
    M3WGN5
    Conserved Domains (2) summary
    COG5038
    Location:6 → 175
    COG5038; Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only]
    pfam14360
    Location:220 → 293
    PAP2_C; PAP2 superfamily C-terminal

  6. XM_045056028.1 → XP_044911963.1  phosphatidylcholine:ceramide cholinephosphotransferase 2

    UniProtKB/TrEMBL
    M3WGN5
    Conserved Domains (2) summary
    COG5038
    Location:6 → 175
    COG5038; Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only]
    pfam14360
    Location:220 → 293
    PAP2_C; PAP2 superfamily C-terminal

  7. XM_019829137.3 → XP_019684696.1  phosphatidylcholine:ceramide cholinephosphotransferase 2

    UniProtKB/TrEMBL
    M3WGN5
    Conserved Domains (2) summary
    COG5038
    Location:6 → 175
    COG5038; Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only]
    pfam14360
    Location:220 → 293
    PAP2_C; PAP2 superfamily C-terminal
Nucleotide Protein
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