U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

WDR46 WD repeat domain 46 [ Felis catus (domestic cat) ]

Gene ID: 101087740, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
WDR46
Official Full Name
WD repeat domain 46
Primary source
VGNC:VGNC:67036
See related
EnsemblRapid:ENSFCTG00005029265
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See WDR46 in Genome Data Viewer
Location:
chromosome: B2
Exon count:
15
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) B2 NC_058372.1 (32066514..32074484, complement)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) B2 NC_018727.3 (34279457..34287702, complement)

Chromosome B2 - NC_058372.1Genomic Context describing neighboring genes Neighboring gene VPS52 subunit of GARP complex Neighboring gene ribosomal protein S18 Neighboring gene beta-1,3-galactosyltransferase 4 Neighboring gene prefoldin subunit 6 Neighboring gene ral guanine nucleotide dissociation stimulator like 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 90S preribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small-subunit processome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
WD repeat-containing protein 46

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058372.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    32066514..32074484 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045057387.1 → XP_044913322.1  WD repeat-containing protein 46 isoform X2

    UniProtKB/TrEMBL
    A0A5F5XLV0
    Conserved Domains (4) summary
    PTZ00449
    Location:12 → 150
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    sd00039
    Location:200 → 236
    7WD40; WD40 repeat [structural motif]
    cl06957
    Location:328 → 413
    BING4CT; BING4CT (NUC141) domain
    cl29593
    Location:200 → 373
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_003986009.5 → XP_003986058.1  WD repeat-containing protein 46 isoform X1

    UniProtKB/TrEMBL
    A0A5F5XLV0, M3W1E4
    Related
    ENSFCTP00005056734.1, ENSFCTT00005082106.1
    Conserved Domains (4) summary
    smart01033
    Location:441 → 519
    BING4CT; BING4CT (NUC141) domain
    sd00039
    Location:200 → 236
    7WD40; WD40 repeat [structural motif]
    cl25539
    Location:200 → 458
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    cl25751
    Location:12 → 150
    DUF4045; Domain of unknown function (DUF4045)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.