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CLEC12B C-type lectin domain family 12 member B [ Felis catus (domestic cat) ]

Gene ID: 101083012, updated on 17-Aug-2024

Summary

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Official Symbol
CLEC12B
Official Full Name
C-type lectin domain family 12 member B
Primary source
VGNC:VGNC:60942
See related
EnsemblRapid:ENSFCTG00005015143
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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See CLEC12B in Genome Data Viewer
Location:
chromosome: B4
Exon count:
7
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) B4 NC_058374.1 (44419324..44428671, complement)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) B4 NC_018729.3 (46410290..46421371, complement)

Chromosome B4 - NC_058374.1Genomic Context describing neighboring genes Neighboring gene C-type lectin domain family 12 member A Neighboring gene uncharacterized LOC111561473 Neighboring gene C-type lectin domain family 1 member B Neighboring gene C-type lectin domain containing 9A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein phosphatase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in natural killer cell inhibitory signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-type lectin domain family 12 member B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058374.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    44419324..44428671 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003988397.5 → XP_003988446.1  C-type lectin domain family 12 member B isoform X1

    UniProtKB/TrEMBL
    A0A337SIZ6, M3WD61
    Related
    ENSFCTP00005030683.1, ENSFCTT00005043138.1
    Conserved Domains (1) summary
    cd03593
    Location:143 → 265
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

  2. XM_019834496.3 → XP_019690055.1  C-type lectin domain family 12 member B isoform X2

    Conserved Domains (1) summary
    cd03593
    Location:92 → 214
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)
Nucleotide Protein
Heading Accession and Version

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