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GDPD1 glycerophosphodiester phosphodiesterase domain containing 1 [ Felis catus (domestic cat) ]

Gene ID: 101081586, updated on 17-Aug-2024

Summary

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Official Symbol
GDPD1
Official Full Name
glycerophosphodiester phosphodiesterase domain containing 1
Primary source
VGNC:VGNC:99062
See related
EnsemblRapid:ENSFCTG00005020511
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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See GDPD1 in Genome Data Viewer
Location:
chromosome: E1
Exon count:
12
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) E1 NC_058381.1 (27611592..27662017, complement)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) E1 NC_018736.3 (29616460..29668559, complement)

Chromosome E1 - NC_058381.1Genomic Context describing neighboring genes Neighboring gene glyceraldehyde-3-phosphate dehydrogenase-like Neighboring gene uncharacterized LOC109494298 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase-like Neighboring gene yippee like 2 Neighboring gene SMG8 nonsense mediated mRNA decay factor Neighboring gene proline rich 11

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lysophospholipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphoric diester hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acylethanolamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycerophospholipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysophospholipase D GDPD1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058381.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    27611592..27662017 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011289103.4 → XP_011287405.1  lysophospholipase D GDPD1 isoform X1

    See identical proteins and their annotated locations for XP_011287405.1

    UniProtKB/TrEMBL
    A0A2I2UXR5, A0A5F5XES2
    Related
    ENSFCTP00005043378.1, ENSFCTT00005059066.1
    Conserved Domains (1) summary
    cd08612
    Location:14 → 311
    GDPD_GDE4; Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4 and similar proteins

  2. XM_045044635.1 → XP_044900570.1  lysophospholipase D GDPD1 isoform X2

    Conserved Domains (1) summary
    cd08612
    Location:1 → 255
    GDPD_GDE4; Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4 and similar proteins

RNA

  1. XR_002738046.2 RNA Sequence

    Related
    ENSFCTT00005058960.1
Nucleotide Protein
Heading Accession and Version

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