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kirrel1a kirre like nephrin family adhesion molecule 1a [ Takifugu rubripes (torafugu) ]

Gene ID: 101077784, updated on 8-Mar-2024

Summary

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Gene symbol
kirrel1a
Gene description
kirre like nephrin family adhesion molecule 1a
See related
Ensembl:ENSTRUG00000011778
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Also known as
kirrel; kirrel1
Orthologs
zebrafish all
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Genomic context

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See kirrel1a in Genome Data Viewer
Location:
chromosome: 8
Exon count:
15
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 8 NC_042292.1 (11893362..11919412, complement)
101 previous assembly FUGU5 (GCF_000180615.1) 8 NC_018897.1 (10256381..10282522, complement)

Chromosome 8 - NC_042292.1Genomic Context describing neighboring genes Neighboring gene Fc epsilon receptor IgFc epsilon receptor Ig Neighboring gene NADH:ubiquinone oxidoreductase core subunit S2 Neighboring gene uncharacterized LOC105416818 Neighboring gene transfer RNA arginine (anticodon UCU)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 1
Names
kin of IRRE like
kirre like nephrin family adhesion molecule 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042292.1 Reference fTakRub1.2 Primary Assembly

    Range
    11893362..11919412 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011606543.2 → XP_011604845.2  kin of IRRE-like protein 1 isoform X2

    UniProtKB/TrEMBL
    H2TYH1
    Related
    ENSTRUP00000065879.1, ENSTRUT00000059334.1
    Conserved Domains (2) summary
    smart00409
    Location:312 → 387
    IG; Immunoglobulin
    cl11960
    Location:389 → 483
    Ig; Immunoglobulin domain

  2. XM_029840371.1 → XP_029696231.1  kin of IRRE-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A674MW80, H2TYH2
    Related
    ENSTRUP00000029731.3, ENSTRUT00000029848.3
    Conserved Domains (3) summary
    smart00409
    Location:312 → 387
    IG; Immunoglobulin
    smart00410
    Location:231 → 302
    IG_like; Immunoglobulin like
    cl11960
    Location:389 → 483
    Ig; Immunoglobulin domain
Nucleotide Protein
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