U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC101075268 kin of IRRE-like protein 1 [ Takifugu rubripes (torafugu) ]

Gene ID: 101075268, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC101075268
Gene description
kin of IRRE-like protein 1
See related
Ensembl:ENSTRUG00000001963
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC101075268 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
15
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 22 NC_042306.1 (6255480..6337155)
101 previous assembly FUGU5 (GCF_000180615.1) Unplaced Scaffold NW_004071179.1 (112239..149586, complement)

Chromosome 22 - NC_042306.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115247863 Neighboring gene purine nucleoside phosphorylase 5b Neighboring gene uncharacterized LOC105418609 Neighboring gene ATP-sensitive inward rectifier potassium channel 10-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
kin of IRRE-like protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042306.1 Reference fTakRub1.2 Primary Assembly

    Range
    6255480..6337155
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029830575.1 → XP_029686435.1  kin of IRRE-like protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A674MUG4
    Conserved Domains (2) summary
    smart00409
    Location:262 → 337
    IG; Immunoglobulin
    cl11960
    Location:339 → 442
    Ig; Immunoglobulin domain

  2. XM_029830576.1 → XP_029686436.1  kin of IRRE-like protein 1 isoform X6

    UniProtKB/TrEMBL
    A0A674P180
    Conserved Domains (2) summary
    smart00409
    Location:212 → 287
    IG; Immunoglobulin
    cl11960
    Location:289 → 392
    Ig; Immunoglobulin domain

  3. XM_029830574.1 → XP_029686434.1  kin of IRRE-like protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A674MUG4
    Conserved Domains (2) summary
    smart00409
    Location:262 → 337
    IG; Immunoglobulin
    cl11960
    Location:339 → 442
    Ig; Immunoglobulin domain

  4. XM_029830571.1 → XP_029686431.1  kin of IRRE-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A674MUG4
    Related
    ENSTRUP00000064824.1, ENSTRUT00000067685.1
    Conserved Domains (2) summary
    smart00409
    Location:312 → 387
    IG; Immunoglobulin
    cl11960
    Location:389 → 492
    Ig; Immunoglobulin domain

  5. XM_029830572.1 → XP_029686432.1  kin of IRRE-like protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A674MUG4
    Related
    ENSTRUP00000079604.1, ENSTRUT00000081006.1

  6. XM_029830573.1 → XP_029686433.1  kin of IRRE-like protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A674MUG4
    Conserved Domains (2) summary
    smart00409
    Location:312 → 387
    IG; Immunoglobulin
    cl11960
    Location:389 → 492
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials