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kirrel3l kirre like nephrin family adhesion molecule 3, like [ Takifugu rubripes (torafugu) ]

Gene ID: 101074566, updated on 8-Mar-2024

Summary

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Gene symbol
kirrel3l
Gene description
kirre like nephrin family adhesion molecule 3, like
See related
Ensembl:ENSTRUG00000000152
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Also known as
kirrel2
Orthologs
human zebrafish all
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Genomic context

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See kirrel3l in Genome Data Viewer
Location:
chromosome: 7
Exon count:
15
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 7 NC_042291.1 (12484202..12514227, complement)
101 previous assembly FUGU5 (GCF_000180615.1) 7 NC_018896.1 (10723428..10754884, complement)

Chromosome 7 - NC_042291.1Genomic Context describing neighboring genes Neighboring gene amyloid beta (A4) precursor-like protein 1 Neighboring gene ST14 transmembrane serine protease matriptase Neighboring gene NPHS1 adhesion molecule, nephrin Neighboring gene FXYD domain containing ion transport regulator 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 2
Names
kin of IRRE like 2
kirre like nephrin family adhesion molecule 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042291.1 Reference fTakRub1.2 Primary Assembly

    Range
    12484202..12514227 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011605614.2 → XP_011603916.1  kin of IRRE-like protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A674NMB1
    Related
    ENSTRUP00000074427.1, ENSTRUT00000063322.1
    Conserved Domains (3) summary
    cd05759
    Location:136 → 217
    Ig2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 (also known as Neph2)
    pfam13895
    Location:222 → 293
    Ig_2; Immunoglobulin domain
    cl11960
    Location:389 → 486
    Ig; Immunoglobulin domain

  2. XM_029839269.1 → XP_029695129.1  kin of IRRE-like protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A674MXC4, A0A674NMB1
    Related
    ENSTRUP00000065864.1, ENSTRUT00000066341.1
    Conserved Domains (3) summary
    cd05759
    Location:136 → 217
    Ig2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 (also known as Neph2)
    pfam13895
    Location:222 → 293
    Ig_2; Immunoglobulin domain
    cl11960
    Location:389 → 486
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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