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rps9 ribosomal protein S9 [ Takifugu rubripes (torafugu) ]

Gene ID: 101074093, updated on 8-Mar-2024

Summary

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Gene symbol
rps9
Gene description
ribosomal protein S9
See related
Ensembl:ENSTRUG00000015896
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Orthologs
human zebrafish all
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Genomic context

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See rps9 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
5
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 7 NC_042291.1 (15183204..15185198)
101 previous assembly FUGU5 (GCF_000180615.1) Unplaced Scaffold NW_004072389.1 (270490..272453, complement)

Chromosome 7 - NC_042291.1Genomic Context describing neighboring genes Neighboring gene leukocyte receptor cluster (LRC) member 8 Neighboring gene RNA binding fox-1 homolog 1, like Neighboring gene membrane bound O-acyltransferase domain containing 7 Neighboring gene uncharacterized LOC115250396 Neighboring gene transmembrane channel-like 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables rRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of translational fidelity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
40S ribosomal protein S9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042291.1 Reference fTakRub1.2 Primary Assembly

    Range
    15183204..15185198
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003977614.3 → XP_003977663.1  40S ribosomal protein S9

    UniProtKB/TrEMBL
    H2UUL1
    Related
    ENSTRUP00000040636.1, ENSTRUT00000040778.3
    Conserved Domains (1) summary
    PTZ00155
    Location:10 → 180
    PTZ00155; 40S ribosomal protein S9; Provisional
Nucleotide Protein
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