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mpdu1b mannose-P-dolichol utilization defect 1b [ Takifugu rubripes (torafugu) ]

Gene ID: 101068830, updated on 8-Mar-2024

Summary

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Gene symbol
mpdu1b
Gene description
mannose-P-dolichol utilization defect 1b
See related
Ensembl:ENSTRUG00000022800
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Also known as
mpdu1
Orthologs
human zebrafish all
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Genomic context

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See mpdu1b in Genome Data Viewer
Location:
chromosome: 8
Exon count:
8
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 8 NC_042292.1 (10809765..10814767, complement)
101 previous assembly FUGU5 (GCF_000180615.1) 8 NC_018897.1 (9164203..9170074, complement)

Chromosome 8 - NC_042292.1Genomic Context describing neighboring genes Neighboring gene SUMO specific peptidase 3b Neighboring gene eukaryotic translation initiation factor 4A1A Neighboring gene small nucleolar RNA SNORD10 Neighboring gene metallo-beta-lactamase domain containing 1 Neighboring gene galactose-3-O-sulfotransferase 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in oligosaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mannose-P-dolichol utilization defect 1 protein
Names
mannose-P-dolichol utilization defect 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042292.1 Reference fTakRub1.2 Primary Assembly

    Range
    10809765..10814767 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011606511.2 → XP_011604813.2  mannose-P-dolichol utilization defect 1 protein

    UniProtKB/TrEMBL
    A0A3B5KCX9
    Conserved Domains (1) summary
    TIGR00951
    Location:48 → 243
    2A43; Lysosomal Cystine Transporter

  2. XM_003966766.3 → XP_003966815.2  mannose-P-dolichol utilization defect 1 protein

    UniProtKB/TrEMBL
    A0A3B5KCX9
    Related
    ENSTRUP00000053243.2, ENSTRUT00000048852.2
    Conserved Domains (1) summary
    TIGR00951
    Location:48 → 243
    2A43; Lysosomal Cystine Transporter
Nucleotide Protein
Heading Accession and Version

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