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LOC101067570 alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like [ Takifugu rubripes (torafugu) ]

Gene ID: 101067570, updated on 21-Dec-2023

Summary

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Gene symbol
LOC101067570
Gene description
alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like
See related
Ensembl:ENSTRUG00000004865
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
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Genomic context

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See LOC101067570 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
2
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 16 NC_042300.1 (1848072..1850999)
101 previous assembly FUGU5 (GCF_000180615.1) 16 NC_018905.1 (276956..281558)

Chromosome 16 - NC_042300.1Genomic Context describing neighboring genes Neighboring gene fibulin-2-like Neighboring gene transfer RNA alanine (anticodon AGC) Neighboring gene BRO1 domain-containing protein BROX Neighboring gene transfer RNA alanine (anticodon AGC)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in oligosaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi stack IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042300.1 Reference fTakRub1.2 Primary Assembly

    Range
    1848072..1850999
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011611739.2 → XP_011610041.1  alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like

    See identical proteins and their annotated locations for XP_011610041.1

    UniProtKB/TrEMBL
    A0A674PAQ1, H2SGT6
    Related
    ENSTRUP00000011618.2, ENSTRUT00000011678.3
    Conserved Domains (1) summary
    pfam05060
    Location:63 → 408
    MGAT2; N-acetylglucosaminyltransferase II (MGAT2)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials