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extl2 exostosin-like glycosyltransferase 2 [ Takifugu rubripes (torafugu) ]

Gene ID: 101066160, updated on 8-Mar-2024

Summary

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Gene symbol
extl2
Gene description
exostosin-like glycosyltransferase 2
See related
Ensembl:ENSTRUG00000031861
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Orthologs
human zebrafish all
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Genomic context

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See extl2 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
5
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 22 NC_042306.1 (9306195..9308438)
101 previous assembly FUGU5 (GCF_000180615.1) 22 NC_018911.1 (6808427..6810807)

Chromosome 22 - NC_042306.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115247855 Neighboring gene ring finger and CCCH-type domains 1b Neighboring gene presenilin associated, rhomboid-like a Neighboring gene fibroblast growth factor 12a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exostosin-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042306.1 Reference fTakRub1.2 Primary Assembly

    Range
    9306195..9308438
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003975590.3 → XP_003975639.2  exostosin-like 2

    UniProtKB/TrEMBL
    A0A674NJA3, A0A674PGQ2
    Related
    ENSTRUP00000073297.1, ENSTRUT00000078977.1
    Conserved Domains (1) summary
    pfam09258
    Location:70 → 327
    Glyco_transf_64; Glycosyl transferase family 64 domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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