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LOC101066088 beta-1,4-galactosyltransferase 1 [ Takifugu rubripes (torafugu) ]

Gene ID: 101066088, updated on 21-Dec-2023

Summary

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Gene symbol
LOC101066088
Gene description
beta-1,4-galactosyltransferase 1
See related
Ensembl:ENSTRUG00000000473
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Also known as
b4galt1
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Genomic context

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See LOC101066088 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) Unplaced Scaffold NW_021821635.1 (265625..275310, complement)
101 previous assembly FUGU5 (GCF_000180615.1) Unplaced Scaffold NW_004073921.1 (65..6077)

NW_021821635.1Genomic Context describing neighboring genes Neighboring gene neurogenin-1-like Neighboring gene exosome complex component RRP40 Neighboring gene RE1-silencing transcription factor-like Neighboring gene nitric oxide-associated protein 1-like Neighboring gene uncharacterized LOC115248445

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cytoskeletal protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NW_021821635.1 Reference fTakRub1.2 Primary Assembly

    Range
    265625..275310 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029832183.1 → XP_029688043.1  beta-1,4-galactosyltransferase 1

    UniProtKB/TrEMBL
    H2RLV2
    Related
    ENSTRUP00000064950.1, ENSTRUT00000089801.1
    Conserved Domains (1) summary
    cd00899
    Location:138 → 355
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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