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LOC101065119 mitochondrial carnitine/acylcarnitine carrier protein-like [ Takifugu rubripes (torafugu) ]

Gene ID: 101065119, updated on 21-Dec-2023

Summary

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Gene symbol
LOC101065119
Gene description
mitochondrial carnitine/acylcarnitine carrier protein-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
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Genomic context

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See LOC101065119 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
9
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 3 NC_042287.1 (716730..720683)
101 previous assembly FUGU5 (GCF_000180615.1) 3 NC_018892.1 (566507..569930, complement)

Chromosome 3 - NC_042287.1Genomic Context describing neighboring genes Neighboring gene 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase-like Neighboring gene non-structural maintenance of chromosomes element 3 homolog Neighboring gene tafazzin-like Neighboring gene V-type proton ATPase subunit S1-like Neighboring gene uncharacterized LOC105419550

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042287.1 Reference fTakRub1.2 Primary Assembly

    Range
    716730..720683
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011621039.2 → XP_011619341.2  mitochondrial carnitine/acylcarnitine carrier protein-like isoform X2

    UniProtKB/TrEMBL
    A0A674MWM3
    Conserved Domains (1) summary
    pfam00153
    Location:106 → 196
    Mito_carr; Mitochondrial carrier protein

  2. XM_003962931.3 → XP_003962980.2  mitochondrial carnitine/acylcarnitine carrier protein-like isoform X1

    UniProtKB/TrEMBL
    H2TW33
Nucleotide Protein
Heading Accession and Version

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Research Materials