U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

hs6st1a heparan sulfate 6-O-sulfotransferase 1a [ Takifugu rubripes (torafugu) ]

Gene ID: 101062077, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
hs6st1a
Gene description
heparan sulfate 6-O-sulfotransferase 1a
See related
Ensembl:ENSTRUG00000015423
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See hs6st1a in Genome Data Viewer
Location:
chromosome: 2
Exon count:
4
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 2 NC_042286.1 (5761483..5799609)
101 previous assembly FUGU5 (GCF_000180615.1) 2 NC_018891.1 (3706397..3744576)

Chromosome 2 - NC_042286.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115248112 Neighboring gene uncharacterized LOC115248127 Neighboring gene UDP-glucose glycoprotein glucosyltransferase 1 Neighboring gene transcription factor Sp3-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparan sulfate 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
heparan-sulfate 6-O-sulfotransferase 1-A-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042286.1 Reference fTakRub1.2 Primary Assembly

    Range
    5761483..5799609
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011618888.2 → XP_011617190.1  heparan-sulfate 6-O-sulfotransferase 1-A-like isoform X1

    UniProtKB/TrEMBL
    H2UR43, H2UR44
    Related
    ENSTRUP00000039417.3, ENSTRUT00000039558.3
    Conserved Domains (1) summary
    pfam03567
    Location:77 → 341
    Sulfotransfer_2; Sulfotransferase family

  2. XM_011618891.2 → XP_011617193.1  heparan-sulfate 6-O-sulfotransferase 1-A-like isoform X2

    UniProtKB/TrEMBL
    H2UR43
    Conserved Domains (1) summary
    pfam03567
    Location:77 → 341
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials