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Gm29721 predicted gene, 29721 [ Mus musculus (house mouse) ]

Gene ID: 101055745, updated on 17-Aug-2024

Summary

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Official Symbol
Gm29721provided by MGI
Official Full Name
predicted gene, 29721provided by MGI
Primary source
MGI:MGI:5588880
See related
AllianceGenome:MGI:5588880
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in thymus adult (RPKM 3.7), bladder adult (RPKM 1.1) and 8 other tissues See more
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Genomic context

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See Gm29721 in Genome Data Viewer
Location:
17 A1; 17
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (6803372..6850465, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (6535973..6583066, complement)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene protein phosphatase 1, regulatory (inhibitor) subunit 2, pseudogene 5 Neighboring gene predicted gene 2808 Neighboring gene fibrillarin pseudogene Neighboring gene predicted gene, 53224 Neighboring gene STARR-positive B cell enhancer mm9_chr17:6657759-6658060 Neighboring gene STARR-positive B cell enhancers mm9_chr17:6806288-6806589 and mm9_chr17:6654863-6655163 Neighboring gene dynein light chain Tctex-type 1C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
predicted gene, 29721; synaptotagmin-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    6803372..6850465 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036160866.1 → XP_036016759.1  synaptotagmin-like protein 3 isoform X1

    Conserved Domains (2) summary
    cl28890
    Location:60 → 108
    FYVE_like_SF; FYVE domain like superfamily
    cl22851
    Location:9 → 123
    PHD_SF; PHD finger superfamily

  2. XM_030250199.1 → XP_030106059.1  synaptotagmin-like protein 3 isoform X3

    Conserved Domains (2) summary
    cl28890
    Location:60 → 108
    FYVE_like_SF; FYVE domain like superfamily
    cl22851
    Location:9 → 123
    PHD_SF; PHD finger superfamily

  3. XM_030250198.1 → XP_030106058.1  synaptotagmin-like protein 3 isoform X2

    UniProtKB/TrEMBL
    F8WHG0
    Conserved Domains (1) summary
    cl22851
    Location:9 → 123
    PHD_SF; PHD finger superfamily
Nucleotide Protein Strain
Heading Accession and Version

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