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CYP39A1 cytochrome P450 family 39 subfamily A member 1 [ Saimiri boliviensis (Bolivian squirrel monkey) ]

Gene ID: 101047750, updated on 17-Aug-2024

Summary

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Official Symbol
CYP39A1
Official Full Name
cytochrome P450 family 39 subfamily A member 1
Primary source
VGNC:VGNC:83196
See related
EnsemblRapid:ENSSBOG00000028378
Gene type
protein coding
RefSeq status
MODEL
Organism
Saimiri boliviensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Saimiriinae; Saimiri
Orthologs
human mouse all
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Genomic context

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See CYP39A1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
102 current BCM_Sbol_2.0 (GCF_016699345.1) Unplaced Scaffold NW_024100919.1 (91244919..91338942, complement)

NW_024100919.1Genomic Context describing neighboring genes Neighboring gene 5S ribosomal RNA Neighboring gene regulator of calcineurin 2 Neighboring gene uncharacterized LOC120363216 Neighboring gene solute carrier family 25 member 27 Neighboring gene tudor domain containing 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024100919 Unplaced Scaffold Reference BCM_Sbol_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables steroid hydroxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bile acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cholesterol homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
24-hydroxycholesterol 7-alpha-hydroxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Saimiri boliviensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Sbol_2.0 Primary Assembly

Genomic

  1. NW_024100919.1 Reference BCM_Sbol_2.0 Primary Assembly

    Range
    91244919..91338942 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010333971.2 → XP_010332273.1  24-hydroxycholesterol 7-alpha-hydroxylase isoform X2

    Conserved Domains (1) summary
    cl12078
    Location:14 → 331
    p450; Cytochrome P450

  2. XM_003923074.3 → XP_003923123.1  24-hydroxycholesterol 7-alpha-hydroxylase isoform X1

    UniProtKB/TrEMBL
    A0A2K6TVP8
    Related
    ENSSBOP00000023727.1, ENSSBOT00000040584.2
    Conserved Domains (1) summary
    cl12078
    Location:35 → 457
    p450; Cytochrome P450
Nucleotide Protein
Heading Accession and Version

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